| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2919 |
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| Symbol | groEL |
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| ID | 5710770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3077174 |
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| End bp | 3078817 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268845 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001534253 |
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| Protein GI | 159045459 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.290389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTA AAGACGTCAA ATTCGACATC GACGCCCGCA ACCGCATGCT CAAGGGTGTC
AACATCCTCG CAGACGCGGT GAAGGTGACC CTGGGCCCCA AGGGCCGCAA CGTGGTTCTG
GACAAGAGCT TCGGCGCGCC GCGCATCACC AAGGACGGTG TCTCCGTCGC CAAGGAAATC
GAACTGGAAG ACAAGTTCGA GAACATGGGC GCGCAGATGG TCAAGGAAGT CGCCTCGCGC
ACCAATGACG AGGCCGGCGA CGGCACCACA ACCGCGACCG TGCTGGCGCA AGCCATCGTC
AAGGAAGGCA TGAAGTCGGT TGCCGCGGGC ATGAACCCGA TGGACCTCAA GCGCGGGATC
GACCTGGCGA CCTCCAAGGT TGTCGAGGCG ATCAAATCCG CCGCCCGTCC CGTGAACGAC
AGCGCCGAAG TGGCGCAGGT CGGCACCATC TCCGCCAACG GCGAGAGCGA GATCGGCCAG
CAGATCGCGG ATGCGATGCA AAAGGTTGGC AACGAGGGTG TCATCACCGT CGAGGAGAAC
AAGGGCCTGG AGACCGAGAC CGACGTGGTC GAGGGCATGC AGTTCGACCG TGGCTATCTG
AGCCCCTATT TCGTGACCAA CCCCGACAAG ATGACCACCG AGTTGGAAGA CGCGATCATC
CTGCTGCACG AGAAGAAGCT CTCGTCGCTG CAGCCGATGG TGCCGCTGCT TGAGTCGGTG
ATCCAGTCCG GCAAGCCGCT GCTGATCATC GCGGAAGACG TGGAAGGCGA AGCGCTCGCC
ACCCTCGTGG TCAACAAGCT GCGCGGCGGT CTGAAGATCG CGGCCGTCAA GGCACCGGGC
TTCGGCGATC GTCGCAAGGC CATGCTGCAG GACATCGCGA TCCTGACCGG TGGCCAGGTG
ATCTCGGAAG ACCTCGGCAT GAAGCTCGAG TCCGTGACCA TCGACATGCT GGGTTCCGCC
AAGCGCGTGT CGATCACCAA GGACGAGACC ACCATCGTCG ACGGCGCCGG TGCCAAGGCC
GAGATCGAAG CCCGCGTGGC CCAGATCCGC AACCAGATCG AGGAGACCAC CTCGGATTAC
GACCGTGAGA AGCTGCAGGA GCGTGTGGCC AAGCTCGCCG GTGGTGTGGC TGTCATCCGC
GTCGGCGGCA TGACCGAGGT CGAAGTGAAA GAGCGCAAGG ACCGTGTGGA CGATGCGCTA
AACGCGACCC GCGCGGCTGT GCAGGAAGGC ATCGTCGTCG GCGGCGGTGT GGCCCTGATC
CAGGCGGCCA AGCATCTCGA CGGTCTGGAA GGCGCGAACA ACGACCAGAA CATCGGCATC
AACATCGTGC GCAAGGCGCT GGAAGCTCCG CTGCGCCAGA TCGCCGAGAA CGCAGGTGTC
GACGGGTCCG TCGTGGCCGG CAAGATCCGC GAAAGCAGTG ACCTGGCCTT CGGGTTCAAC
GCGCAGACCG AAGAATATGG CGACATGTTC AAGTTCGGTG TGATCGACCC GGCCAAGGTG
GTGCGCACCG CGCTGCAGGA TGCGGCCTCC ATCGCCGGTC TGCTGATCAC CACCGAAGCA
ATGGTGGCCG ACAAGCCCGC CAAGGAAGGT GCCGGCGCCG GTGGCGGCAT GCCCGACATG
GGCGGCATGG GCGGCATGAT GTAA
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| Protein sequence | MAAKDVKFDI DARNRMLKGV NILADAVKVT LGPKGRNVVL DKSFGAPRIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASR TNDEAGDGTT TATVLAQAIV KEGMKSVAAG MNPMDLKRGI
DLATSKVVEA IKSAARPVND SAEVAQVGTI SANGESEIGQ QIADAMQKVG NEGVITVEEN
KGLETETDVV EGMQFDRGYL SPYFVTNPDK MTTELEDAII LLHEKKLSSL QPMVPLLESV
IQSGKPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLQ DIAILTGGQV
ISEDLGMKLE SVTIDMLGSA KRVSITKDET TIVDGAGAKA EIEARVAQIR NQIEETTSDY
DREKLQERVA KLAGGVAVIR VGGMTEVEVK ERKDRVDDAL NATRAAVQEG IVVGGGVALI
QAAKHLDGLE GANNDQNIGI NIVRKALEAP LRQIAENAGV DGSVVAGKIR ESSDLAFGFN
AQTEEYGDMF KFGVIDPAKV VRTALQDAAS IAGLLITTEA MVADKPAKEG AGAGGGMPDM
GGMGGMM
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