Gene Dshi_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2907 
Symbol 
ID5710758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand+ 
Start bp3065916 
End bp3066521 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID641268833 
Productconserved hypothetical protein DUF1285 
Protein accessionYP_001534241 
Protein GI159045447 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0794493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.601821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA CTATGAGCGG ACAAAACATC GTGACCCCCA CCGCGGACGG GCTGGCGGCC 
TCGGCGCGCG CCGCCTCGAA AAAGGGCCCG CCGCCGGTGC ATCTGTGGAA CCCGCCCTTC 
TGCGGGGATC TGGATATCCA CATCGCCCGC GACGGGACCT GGTTCTACCA GGGCAGCCCG 
ATCGGGCGCG CGCCGCTGGT GCGCCTGTTC TCTTCGATCC TGAAGGTCGA GGACGGGAAA 
TTCTACCTCG TCACCCCGGT CGAGAAGGTC GGCATCACCG TAGAGGACGC GCCCTTCGTG 
GCCACGGATT TCGACGTCAC CGACCCCGGC CCGGATCAGA CCATCACCTT CACCACCCAT 
GTGGGCGACA CCGCCGACGC GGGCCCCGAC AACCCGATCC GGGTCACGCG CCACCCCGAA 
ACCGGGGAGC CCGCACCCTA CGTCCATATC CGCCGCGGGC TGGAGGCGCT GATCGACCGC 
AAGAGCTTCT ACCGGCTGGT GGAGATCGGC GAGACCGCCG CGCTCGACGG GACCGACTGG 
TTCGGCATCC GCTCCAGCGG GCGGTTCTTC CCGATGATCC CGACGGCGGA GCTGGCCGAG 
GACTGA
 
Protein sequence
MAKTMSGQNI VTPTADGLAA SARAASKKGP PPVHLWNPPF CGDLDIHIAR DGTWFYQGSP 
IGRAPLVRLF SSILKVEDGK FYLVTPVEKV GITVEDAPFV ATDFDVTDPG PDQTITFTTH 
VGDTADAGPD NPIRVTRHPE TGEPAPYVHI RRGLEALIDR KSFYRLVEIG ETAALDGTDW 
FGIRSSGRFF PMIPTAELAE D