Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2897 |
Symbol | |
ID | 5710748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3053287 |
End bp | 3053973 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641268823 |
Product | hypothetical protein |
Protein accession | YP_001534231 |
Protein GI | 159045437 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAG TAATTTCACG GCTCTTCAGC GCCGAGGCGG GGGCCAACAA GGTCGCCAAA ACGTTCGAGC GCGCGCGGTT TCCCCGGCGC GATACCCACG TGGTGCGCAT GGGCGAGGAT CATACGGTGG CTTCGGTGAC CGACGCGATG GTGTCGCTTG GCGTCGCCGA AGAGACGGCC CGGGCCTATA CCTCCAAGAT GGCCGATGGC GGTGCGGTAT TCGTGGTGAA GGCGACCTAT AAGCCGCTGA CCGCCAAGAC CATCGCCCGT GAGATCCTCG ATGCTGCCGA TACGGTCGAC ATGGGGGCGG TCGAGGAAGA GAACTGGGTG AAGGACGAGA TCGAGCCGAT GTCTTCGGTG CTTGACGATC ACCCGCTGTT CTTCACGCGG GTCCGCGAGA CCCACGAGCG CAAGGGGCCG GTGACCGCCG GGATCATGCC GCTTCTGTCC AAGCGCAAAC CGCATTCCAG TTCGGTGATT TCCGGGGGCA AGAAAATGTC CTTCTGGCCC ATGCCGCTCC TGCGCGAGGG GCTGATCACC AAGCCGCGCC TGCGCAAGGA TGGGCCGGTG ACCGCCCGGC TCCCCTTTCC CCTGCTGAGC GGCGGCAAGC GGGACAAATC GGTGATCCCC GGCGGCAAGC TGATCGTGGA AGAGAACCTC GGCATCCCGT CGATCATCCG GCGCTGA
|
Protein sequence | MATVISRLFS AEAGANKVAK TFERARFPRR DTHVVRMGED HTVASVTDAM VSLGVAEETA RAYTSKMADG GAVFVVKATY KPLTAKTIAR EILDAADTVD MGAVEEENWV KDEIEPMSSV LDDHPLFFTR VRETHERKGP VTAGIMPLLS KRKPHSSSVI SGGKKMSFWP MPLLREGLIT KPRLRKDGPV TARLPFPLLS GGKRDKSVIP GGKLIVEENL GIPSIIRR
|
| |