Gene Dshi_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2890 
Symbol 
ID5710741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3046511 
End bp3046822 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content70% 
IMG OID641268816 
Producthypothetical protein 
Protein accessionYP_001534224 
Protein GI159045430 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000199627 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG CGCGCCAGAT CGACGTGGAT ATCGCGGTGT TCGCGGGGCG GTTCGACAGT 
CAGCCGCTGG TTTTCGCGCA TCTGCTCGAC GTGGCGCCGG ATCTCGATCT CGGCCATGTG
GAGGTGCTGC AGGATCGCGG CATCCGGCGC CGGCTGGAGG GGTTCTTTCC GCCGCAAACG
GTCACCCGCC TGCTGGTGGC GCTGGACGAG GATGACACGC TCGTTCTGGT ACTGCCGGAG
GCCGGGTTCT TCGAGGGCAG CGCCCGCCTG AGTGCTCTCG GCCCGGCGCG GGGGCGGGTC
CTGCGGGCAT GA
 
Protein sequence
MTGARQIDVD IAVFAGRFDS QPLVFAHLLD VAPDLDLGHV EVLQDRGIRR RLEGFFPPQT 
VTRLLVALDE DDTLVLVLPE AGFFEGSARL SALGPARGRV LRA