| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2883 |
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| Symbol | sucA |
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| ID | 5710734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3036507 |
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| End bp | 3039470 |
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| Gene Length | 2964 bp |
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| Protein Length | 987 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268809 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001534217 |
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| Protein GI | 159045423 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.684805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.693024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AATCTCCGAA CGACCTCTTC CATGCCTCGA GCTTCATGCA AGGGCACAAC
GCGGCCTACC TTGAGCAGCT CTATGCCCAG TATGCCAACG ATCCCAACGC GGTCGACGCC
GCCTGGGCGG AGTTCTTTCG CGCGCTCGGG GATGCCGAGC TCGACGTGAA GGCCGAGGCA
CAGGGCCCGT CCTGGGCGCG CCGCGACTGG CCGCCGACCC CGAATGACGA CCTGACCGGC
GCGCTGACGG GCGAATGGCC CGCCGCCCCG GTGACCGAGA CCAAGGCCGC CGGCGAGAAG
ATCGCCGCCA AGGCCGCCGA GAAAGGCATC CAGGTGTCCG ACGACCAGAT CAAGCGCGCG
GTGCTCGACA GCATCCGGGC GCTGATGCTG ATCCGGGCCT ACCGGATCCG GGGGCATCTG
GCCGCGGATC TCGACCCGCT GAACATGCGC GATGAAAACC TGCAGCCGGA GCTCGACCCG
AAATCCTACG GCTTCACCGA TGCCGACATG GATCGACCGA TCTTCATCGA CAACGTGCTG
GGGCTGCAGG TCGCCTCGAT GCGCCAGATC GTCGAGATCG TGAAGCGGAC CTATTGCGGC
ACCTTCGCGC TGCAATACAT GCACATTTCC GATCCCGAAC AGGCCGGGTG GCTCAAGGAG
CGGATCGAAG GGTTCGGCAA GGAGATCGCG TTTACCCGCG AGGGCCGGAA GGCGATCCTG
AACAAGCTGG TGGAGGCCGA GGGCTTCGAG AAGTTCCTCC ATGTGAAATA CATGGGCACC
AAGCGCTTCG GGCTGGATGG CGGCGAGGCG CTGGTCCCGG CGATGGAGCA GATCATCAAG
CGCGGCGGCA GCCTGGGGGT CAAGGAAATC GTCATCGGAA TGCCCCACCG CGGCCGCCTG
TCGGTGCTGG CCAACGTGAT GTCGAAGCCC TACCGCGCGA TTTTCAACGA ATTCCAGGGC
GGATCGTTCA AGCCCGAGGA TGTCGACGGC TCGGGCGACG TGAAATACCA TCTCGGCGCG
TCGTCGGACC GGGAATTCGA CGGCAACACG GTGCACTTGT CGCTGACCGC GAACCCCTCG
CACCTGGAGG CGGTGAACCC CGTGGTTCTG GGCAAGGCAC GCGCCAAGCA GGATCAACTG
GGCGATCCCG AACGGGTGGG CGTGCTGCCC ATCCTGCTGC ACGGGGACGC GGCCTTCGCA
GGCCAGGGCG TGGTGGCGGA ATGCTTCGCG CTGTCGGGCC TGCGCGGGCA CAAGACCGGT
GGCACGATCC ATATCGTGGT GAACAACCAG ATCGGGTTTA CCACAGCGCC GCATTTCAGC
CGCTCCAGCC CCTATCCCAC GGACAACGCG CTGGTGGTGG AAGCCCCGAT CTTCCACGTC
AACGGCGACG ATCCGGAGGC GGTGGTCCAT GCGGCCAAGG TCGCGACCGA GTTCCGCCAG
AAATTCCACA AGGACGTGGT GCTGGACATC TTCTGCTATC GCCGCTTCGG GCATAACGAG
GGCGATGAGC CCATGTTCAC CAACCCGATC ATGTACAAGC GGATCAAGGG TCACAAGACG
ACCCTGCAGC TCTATACCGA CCGGCTGGTC AAGGACGGGC TGATCCCCGA GGGCGAGATC
GAGGACATGA AGGCCGCCTT CCAGGCGCAT CTGAACGAAG AGTTCGAGAT CGGCAAGGAT
TACAAGCCGA ACAAGGCCGA CTGGCTGGAC GGGCGCTGGT CGCACCTGAA CACCGACAAG
GAAGACTACC AGCGCGGCCA GACCGCCATC AAACCCGAGA CGATGGCCGA GGTCGGCGAA
GCGCTGATCC GGGTGCCCGA CGGGTTCCCG ATGCACAAGA CCATCGGACG GCTGCTGGAC
GCCAGGGCCA AGATGTTCGA GACCGGCGCA GGTTTCGACT GGGCCACGGC CGAGGCGCTG
GCCTTCGGCT CGCTCCTGAC CGAGGGCTAC CCGGTCCGAC TGTCGGGGCA GGATTCCACC
CGCGGCACGT TCTCGCAGCG CCATTCGGGC ATCGTGAACC AGGAGACCGA AGAGCGCTAC
TATCCGCTGA ACCACATCCG CGAGGGCCAG GCGCGCTACG AAGTGATCGA CAGCGCCCTG
TCGGAATACG CGGTGCTCGG GTTCGAGTAT GGCTATTCGC TCGCCGAGCC CAATGCGCTG
ACCATGTGGG AAGCGCAGTT CGGCGATTTC GCCAACGGTG CGCAGATCAT GTTCGACCAG
TTCATCAGCT CGGGCGAGCG CAAATGGCTG CGGATGTCCG GCCTTGTGAT GCTGCTGCCC
CACGGGTTCG AGGGCCAGGG GCCGGAGCAC TCCTCGGCGC GGCTGGAGCG GTTCCTGCAG
ATGTCGGCGG AGGACAACTG GATCGTGGCG AACTGCACCA CACCGGCGAA CTACTTCCAC
ATCCTGCGGC GGCAATTGCA CCGGACCTTC CGCAAGCCGC TGGTCCTGAT GACGCCCAAG
TCGCTCCTGC GGCACAAGCT GGCGATCTCG AATGCCGAGG ATTTCACCAC CGGGTCGAGC
TTCCACCGGG TGCTGTGGGA CGACGCGCAG AAGGGCAACT CGGATACCAC GCTGCGACCG
GACGACAAGA TCAAGCGTGT CGTGCTGTGT TCCGGCAAGG TCTATTATGA CCTGCTGGAG
GAACGCGACG CCCGCGGGAT CGACGATATC TACCTGCTGC GTCTGGAGCA GTTTTATCCC
TTCCCGGCGC TGGCCATGAT GAAGGAGCTG GAGCGCTTCA AGGGCGCGGA GATGGTCTGG
TGCCAGGAAG AACCCAAGAA CCAAGGGGCC TGGACCTTCG TGGAGCCGAA CCTCGAATGG
GTGCTGAGCC GCATCGGCGC CAAGCATACC CGCCCGGTCT ATGCCGGACG CGCGGCATCG
GCGTCGCCCG CCACGGGTCT GGCCAGCCAG CACAAAGCAC AACAAGCCGC GCTCGTGAAC
GAAGCGCTTA CGATTGAGGG ATAA
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| Protein sequence | MTDQSPNDLF HASSFMQGHN AAYLEQLYAQ YANDPNAVDA AWAEFFRALG DAELDVKAEA
QGPSWARRDW PPTPNDDLTG ALTGEWPAAP VTETKAAGEK IAAKAAEKGI QVSDDQIKRA
VLDSIRALML IRAYRIRGHL AADLDPLNMR DENLQPELDP KSYGFTDADM DRPIFIDNVL
GLQVASMRQI VEIVKRTYCG TFALQYMHIS DPEQAGWLKE RIEGFGKEIA FTREGRKAIL
NKLVEAEGFE KFLHVKYMGT KRFGLDGGEA LVPAMEQIIK RGGSLGVKEI VIGMPHRGRL
SVLANVMSKP YRAIFNEFQG GSFKPEDVDG SGDVKYHLGA SSDREFDGNT VHLSLTANPS
HLEAVNPVVL GKARAKQDQL GDPERVGVLP ILLHGDAAFA GQGVVAECFA LSGLRGHKTG
GTIHIVVNNQ IGFTTAPHFS RSSPYPTDNA LVVEAPIFHV NGDDPEAVVH AAKVATEFRQ
KFHKDVVLDI FCYRRFGHNE GDEPMFTNPI MYKRIKGHKT TLQLYTDRLV KDGLIPEGEI
EDMKAAFQAH LNEEFEIGKD YKPNKADWLD GRWSHLNTDK EDYQRGQTAI KPETMAEVGE
ALIRVPDGFP MHKTIGRLLD ARAKMFETGA GFDWATAEAL AFGSLLTEGY PVRLSGQDST
RGTFSQRHSG IVNQETEERY YPLNHIREGQ ARYEVIDSAL SEYAVLGFEY GYSLAEPNAL
TMWEAQFGDF ANGAQIMFDQ FISSGERKWL RMSGLVMLLP HGFEGQGPEH SSARLERFLQ
MSAEDNWIVA NCTTPANYFH ILRRQLHRTF RKPLVLMTPK SLLRHKLAIS NAEDFTTGSS
FHRVLWDDAQ KGNSDTTLRP DDKIKRVVLC SGKVYYDLLE ERDARGIDDI YLLRLEQFYP
FPALAMMKEL ERFKGAEMVW CQEEPKNQGA WTFVEPNLEW VLSRIGAKHT RPVYAGRAAS
ASPATGLASQ HKAQQAALVN EALTIEG
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