| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2876 |
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| Symbol | mdh |
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| ID | 5710727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3029964 |
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| End bp | 3030926 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268802 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001534210 |
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| Protein GI | 159045416 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC CCAAGATCGC CCTTATCGGC GCAGGTCAGA TCGGTGGCAC CCTTGCCCAC
CTCGTCGCAC TCAAGGAACT CGGGGACGTC GTGTTGTTCG ACATCGCGGA CGGCACCCCC
CAGGGCAAGG CACTGGATAT CGCCGAAAGC GGCCCGGTGG AGCGTTTCGA CGCCAGCCTG
AAGGGCACCA CGGATTACGC CGACATTGCG GGCGCGGATG TCTGCATCGT CACCGCCGGT
GTGCCGCGCA AGCCGGGCAT GTCGCGCGAT GACCTGTTGG GCATCAACCT CAAGGTGATG
AAATCCGTGG GCGAGGGCAT CGCGGCCAAC GCGCCGGATG CCTTCGTGAT CTGCATCACC
AACCCGCTGG ATGCGATGGT CTGGGCGTTG CAGCAATTCT CGGGCCTGCC CAAGGAGAAG
GTCGTCGGCA TGGCCGGTGT GCTGGACAGC GCGCGGTTCC GCCACTTCCT GGCCGAGGAA
TTCAATGTCT CGATGAAGGA CGTGACCGCC TTCGTGCTGG GCGGGCATGG CGATACCATG
GTGCCGCTGA CACGCTATTC CACCGTGGCG GGCATTCCGT TGCCGGACCT GGTGGAGATG
GGCTGGACCA GCCAGGAGAA ACTCGACGCG ATTGTGCAGC GCACCCGCGA TGGCGGCGCC
GAGATTGTCG GCCTGCTCAA GACCGGCTCC GCCTTCTATG CTCCGGCCGC TTCGGCGGTG
GAGATGGCGG AAGCCTATCT CAAGGACCAG AAGCGCCTGC TGCCTTGTGC GGCTTATTGC
GACGGCGAGT TCGGCCTGAA CGACATGTAT GTCGGCGTGC CGACCATCAT CGGGGCCGGC
GGTATCGAGA AGGTCGTCGA CATCAAGCTT GGCAAGGACG AGCAGGCGAT GTTCGACAAC
TCCGTCAACG CGGTGAAGGG CCTGATGGAA GCCTGCAAGG GCATCGACGA CTCGCTGGTC
TGA
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| Protein sequence | MARPKIALIG AGQIGGTLAH LVALKELGDV VLFDIADGTP QGKALDIAES GPVERFDASL
KGTTDYADIA GADVCIVTAG VPRKPGMSRD DLLGINLKVM KSVGEGIAAN APDAFVICIT
NPLDAMVWAL QQFSGLPKEK VVGMAGVLDS ARFRHFLAEE FNVSMKDVTA FVLGGHGDTM
VPLTRYSTVA GIPLPDLVEM GWTSQEKLDA IVQRTRDGGA EIVGLLKTGS AFYAPAASAV
EMAEAYLKDQ KRLLPCAAYC DGEFGLNDMY VGVPTIIGAG GIEKVVDIKL GKDEQAMFDN
SVNAVKGLME ACKGIDDSLV
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