Gene Dshi_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2873 
Symbol 
ID5710724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3027513 
End bp3028076 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID641268799 
Productputative NnrU protein 
Protein accessionYP_001534207 
Protein GI159045413 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTC TTGTCCTGAT CGCCGGTCTC GCCCTCTGGG CCGGGGCCCA CTACTTCAAG 
CGGCTGATGC CGGCGCAGCG CGCCGCGATG GGGGACAAGG GCAAGGCCGT CGTCGCCGTC
GCCATCGTCG CCAGCATCGT GCTGATGGTG ATCGGTTACC GCGGGGCGGA GTTCGTTTTT
CTCTGGTCGC CGCCCGCCTT CATGACCCAT GTGAACAATA CGCTGATGCT GTTCGCGCTC
TGGGTCTACG GATCGAGTGC GGCCAAGGGC GCGAAGGCCT GGCCCGCCAA CAAGATCCGG
CACCCGCAAC TGACCGGGGT CAAGATCTGG GCGCTCGCGC ACCTGCTGGT CAATGGCGAT
CTGGCCTCGA TCGTGCTTTT CGGCGGCTTG CTGGCCTGGG CGGTGGGCGA AGTGATCCTG
ATCAACAAGG CCGAGCCCGA CTGGACCCCG CCCGAGACGG CCGGGATGAA GACCAAGATC
CGCCTCGCTG TGATCACGGT CGTCCTCTAC CTGGTGATCG GCGGCATCCA TGCCTGGCTC
GGCGTCTGGC CGTTCCCTGC ATAA
 
Protein sequence
MYFLVLIAGL ALWAGAHYFK RLMPAQRAAM GDKGKAVVAV AIVASIVLMV IGYRGAEFVF 
LWSPPAFMTH VNNTLMLFAL WVYGSSAAKG AKAWPANKIR HPQLTGVKIW ALAHLLVNGD
LASIVLFGGL LAWAVGEVIL INKAEPDWTP PETAGMKTKI RLAVITVVLY LVIGGIHAWL
GVWPFPA