| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2868 |
|---|
| Symbol | |
|---|
| ID | 5710719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3024581 |
|---|
| End bp | 3025060 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641268794 |
|---|
| Product | cytochrome c |
|---|
| Protein accession | YP_001534202 |
|---|
| Protein GI | 159045408 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3909] Cytochrome c556 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCACA CACGCCTTTG CGCGGCAGCG CTGATCGGGG CCCTCGGGCT CGGGGCCGGG
GTACCCACAA TCGCCGTGGC CCAGGACAGT TTCGAGAACC AGCTCAAGGC GCGGCAGGGT
CAGTTTCGCC TGATCGCGCT GAACCTCGGG GTTCTGGGAA ACATGGCCAA GGGCGATATC
CCCTATGATG CCGAGGCGGC GCAGGCGGCG GCGGACAACC TCGTGACCGT GGCGGCGATC
ACCCAAGGCT TGCTATGGCC CGAAGGTTCG GATGCCATGA GCATCGACGG CACCCGCGCG
ATGCCTTCGA TCTGGGAAGA CAATGCAGAT TTCGTGGAGA AATGGGAGGC GGTTGCGGCA
GCGGCCGATG GGCTCGCCGC CGTGGCAGGA GATGGGCAGG CGGCGCTTGG CCCCGCGCTC
GGGCCGATGG GGGCCACGTG CAAGTCCTGC CACGAGGCGC ATCGCGAACC GGACAGCTAA
|
|---|
| Protein sequence | MIHTRLCAAA LIGALGLGAG VPTIAVAQDS FENQLKARQG QFRLIALNLG VLGNMAKGDI
PYDAEAAQAA ADNLVTVAAI TQGLLWPEGS DAMSIDGTRA MPSIWEDNAD FVEKWEAVAA
AADGLAAVAG DGQAALGPAL GPMGATCKSC HEAHREPDS
|
|---|
| |