| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2865 |
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| Symbol | sdhA |
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| ID | 5710716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3021696 |
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| End bp | 3023498 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268791 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001534199 |
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| Protein GI | 159045405 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTT ACGAATACGA GACGCATAAC TATGACGTCG TGGTCGTCGG GGCCGGTGGC
GCGGGCCTGC GCGCGACCCT CGGCATGGCC GAGCAGGGGC TGCGCACCGC CTGCATCTCC
AAGGTCTTTC CGACCCGCTC GCACACCGTG GCGGCCCAGG GCGGTATCGC CGCCTCGCTG
TCCAACATGG GCCCCGACCA TTGGCAGTGG CACATGTACG ACACCGTCAA GGGCTCCGAC
TGGCTGGGCG ATACCGACGC CATGGAATAC CTCGCCCGCG AGGCGCCCAA GGCGGTGTAC
GAGCTGGAAC ATTACGGCGT ACCGTTCTCG CGCACCGAAG AGGGCAAGAT CTACCAGCGG
CCCTTCGGCG GCCATACCAC CGAGTTCGGC GAAGGCCCCC CGGTGCAGCG CACCTGCGCC
GCCGCCGACC GCACGGGCCA TGCGATCCTG CACACGCTCT ACGGCCAGTC GCTCAAGAAC
AATGCCGAGT TCTTCATCGA GTATTTCGCC ATCGACCTGA TCATGTCCGA GGACGGGCAG
TGCCAGGGCG TCGTCTGCTG GAAACTCGAT GACGGCACCA TCCACGTGTT CAACGCCAAG
ATGACAGTGC TGGCCACGGG CGGCTACGGG CGCGCCTATT TCTCGGCCAC TTCCGCCCAT
ACCTGCACCG GCGACGGCGG CGGCATGGTC GCGCGCCAGG GGCTGCCGCT CCAGGACATG
GAATTCGTGC AATTCCACCC CACCGGCATC TACGGCGCGG GGTGTCTGAT CACCGAGGGC
GCCCGCGGCG AGGGCGGCTA CCTGACCAAC TCCGAGGGCG AGCGGTTCAT GGAGCGCTAT
GCGCCCACCT ACAAGGATCT CGCGTCGCGC GACGTGGTCA GCCGCTGCAT GACCATGGAG
ATCCGCGAGG GCCGCGGCGT CGGCCCCGAC GGCGACCATA TCCACCTGCA CCTCAACCAC
CTGCCGCCGG AAACCCTGGC CCTGCGCCTG CCGGGTATCT CGGAGAGCGC GCGCATCTTC
GCCGGGGTGG ACGTCAACAA GGAGCCGATC CCGGTCCTGC CGACGGTCCA TTACAACATG
GGCGGTATCC CCACGAACTA CTGGGGCGAG GTGCTGAACC CCACCGCCGA GGATCCCGAC
CGCATCGCGC CGGGCCTGAT GGCCGTGGGC GAGGCGGGCT GTGCCTCGGT GCACGGGGCC
AACCGGCTCG GGTCCAACTC CCTGATCGAC CTTGTGGTCT TCGGCCGGGC GGCGGCGATC
AAGGCCGGGC AGGTCGTGGA CCCGACCGTG TCCAATCCGA CCCTGAACCA GGCCTCCATC
GACGCCGCAC TCGCGCGCTT CGACGGGCTG CGCCACGCCA AGGGCAACGT GTCGACCGCC
GAGCTGCGCC TCGAGATGCA GAAGACCATG CAGGCCGACG CCGCCGTGTT CCGCACCGAC
AAGACCCTCG CCGAAGGGGT CCAGAAGATG TACGGCGTCG CGGGCAAGGT GGACGACATC
AAGGTCACCG ACCGCTCGCT GGTGTGGAAC TCCGACCTGA TGGAGACGCT GGAGCTGACC
AACCTGATGC CCAACGCACT GGCCACCATC GTGTCCGCCG AGGCCCGCAA GGAATCCCGC
GGCGCCCACG CCCACGAGGA TTACGCCGAC CGCGACGACG AGAACTGGCG CAAGCACACG
CTGGCCTACG TGAACGGCAA GGTCGACCTC GACTACCGCC CGGTCCACCT CAACCCGCTG
CTGGGCCACA ACGAGGGCGG CATCGACCTC AAGAAAATCG CACCCAAGGC GCGGGTGTAT
TAA
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| Protein sequence | MSAYEYETHN YDVVVVGAGG AGLRATLGMA EQGLRTACIS KVFPTRSHTV AAQGGIAASL
SNMGPDHWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR
PFGGHTTEFG EGPPVQRTCA AADRTGHAIL HTLYGQSLKN NAEFFIEYFA IDLIMSEDGQ
CQGVVCWKLD DGTIHVFNAK MTVLATGGYG RAYFSATSAH TCTGDGGGMV ARQGLPLQDM
EFVQFHPTGI YGAGCLITEG ARGEGGYLTN SEGERFMERY APTYKDLASR DVVSRCMTME
IREGRGVGPD GDHIHLHLNH LPPETLALRL PGISESARIF AGVDVNKEPI PVLPTVHYNM
GGIPTNYWGE VLNPTAEDPD RIAPGLMAVG EAGCASVHGA NRLGSNSLID LVVFGRAAAI
KAGQVVDPTV SNPTLNQASI DAALARFDGL RHAKGNVSTA ELRLEMQKTM QADAAVFRTD
KTLAEGVQKM YGVAGKVDDI KVTDRSLVWN SDLMETLELT NLMPNALATI VSAEARKESR
GAHAHEDYAD RDDENWRKHT LAYVNGKVDL DYRPVHLNPL LGHNEGGIDL KKIAPKARVY
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