| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2850 |
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| Symbol | |
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| ID | 5710701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3007134 |
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| End bp | 3008669 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268776 |
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| Product | putative ATPase |
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| Protein accession | YP_001534184 |
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| Protein GI | 159045390 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.935903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCC CCGCCATCCA GTTCTCCGAC GATCAGGCAG ATGCCTATGA CCGCGTGGCC
GACGCTCTGG CCGCCGCCGG GGTGGACCTG GCCGACGAGA CGCTGATGCC CCCGCGGGAG
GGGGCGGCGT CCTCGGTGCT GGCGGTTCTG GGCAAGGCGG GGTCCGGCAA GACGCTGCTC
CTGGCGCGGC TGGCGGAGGA TCTGATCCGG GCCGGGGTCG AGATCGTCTC GGGCGACTGG
GAGGGGCGGC GGCGCAAGGA CCGGCGCACC CTGGCGATCC TGGCGCCGAC CAACAAGGCC
GCCTGGGTGC TGCGGATGCG GGGGGTGCCG GCGACGACCA TTCACCGGAT CCTCTACACC
CCGGTCTACG ATCCGGAATA CGAAAAGATC GCCGAATGGC TCGCGGGCAG CGGCGACCGG
CCGGTGGTCG AGGGGCTGTC GGAGGCCGCG CTGGACCGGG CCAAGGCATT TTTCGAGGCG
CAGAAATCGG TGCCCGGGGC GCTGGCGGCG GCGGGGCTGC GGGGGTCGGA TTTCATCACC
GGCTGGAAGC GGCGCGAGGA CCCGTTGGAC ATTGGATTCG TGGACGAATC CTCGATGCTC
GACGCGCGCC AGCTCGACGA TCTGCGCGAG ATCTTCCCCA CGCTGTGCCT GTTCGGCGAC
CCCGCACAGC TCGCCCCCGT GGGCCAGTCG GGCCAGATGG TGTTCGAGAC CCTGCCCGCG
GAGCGGCAGC TGACCCTGAG CCGGGTGCAC CGGCAGGCCA AGGACAACCC GATCCTCGAT
CTCGCCCATG CGCTGGCCGA CCCGGAGGTG GATTTCAACC GGTTCGAGCG GATGGTCGAA
GAGGCTGCGT CCCGCGACGA CCGGGTGGTG GTGCAGGGCC GGGTGGAGGC GGCGCTGATG
GCGCGGTCTC CGGCGCTGGT CTGGCGCAAC GCGACGCGGA TCCGGATGAT CCATGCGTTC
CGGGCGGCTT ACGGTGCGCC GCCGGATGCG CTGCTGGAGG GCGAGCCGCT GATCTGTGAC
GGGATCGAGT TGCCGCTGAA GCATCGCAAG AAGCGGATCG ACCTGGAGGC GCGGGGGCTG
ATCAAGGGGG CGCAGGTGAT CTATCTCGGG CCCGGTCGCA AGCCCGGGTT TTCCAAGCTG
CATGTGGTGG GCGCCGAGGC GCCCGAGGTC AGCGCCGCCT CGATCGTGAA GATCGAGATG
CCCGACGAGG AGGAGCCGTT CATCCCCTAT GCTGCGCGGA TGGGGGCGAC GTTTCTGCAC
GGGGCGGCGG TGACGATCCA CAAGGCGCAG GGCAGCCAGT GGGACACGGT GCAGGTCTTC
GCGCCGGACC TGTCGGCGGC GGCCTGGGCC GGGCGGGTGG AGGCGGGGCA ACCGTTGTGG
AAGCGGCTGG CCTACGTGGC GATCACCCGG GCGCAGGAGC GGCTGATCTG GGTGACGCGG
GCACGGCTGG CGCGGCCGGA CGCCCCCCTT GGCACGGCGG ATCTGAAGGC GGCGCCTGCG
CCGCTGGTGT TGGAGCAGGA GGAGGTGGAG CCATGA
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| Protein sequence | MTLPAIQFSD DQADAYDRVA DALAAAGVDL ADETLMPPRE GAASSVLAVL GKAGSGKTLL
LARLAEDLIR AGVEIVSGDW EGRRRKDRRT LAILAPTNKA AWVLRMRGVP ATTIHRILYT
PVYDPEYEKI AEWLAGSGDR PVVEGLSEAA LDRAKAFFEA QKSVPGALAA AGLRGSDFIT
GWKRREDPLD IGFVDESSML DARQLDDLRE IFPTLCLFGD PAQLAPVGQS GQMVFETLPA
ERQLTLSRVH RQAKDNPILD LAHALADPEV DFNRFERMVE EAASRDDRVV VQGRVEAALM
ARSPALVWRN ATRIRMIHAF RAAYGAPPDA LLEGEPLICD GIELPLKHRK KRIDLEARGL
IKGAQVIYLG PGRKPGFSKL HVVGAEAPEV SAASIVKIEM PDEEEPFIPY AARMGATFLH
GAAVTIHKAQ GSQWDTVQVF APDLSAAAWA GRVEAGQPLW KRLAYVAITR AQERLIWVTR
ARLARPDAPL GTADLKAAPA PLVLEQEEVE P
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