| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2846 |
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| Symbol | |
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| ID | 5710697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3003577 |
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| End bp | 3004542 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268772 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001534180 |
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| Protein GI | 159045386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.207886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG CCACCCTCCT GCAAGTCCTC GACAGCACGA TCCGTCTCGC CACGCCGCTG
CTGCTCGCTT GCCTGGCGGG GCTGTTTTCC GAACGCGCGG GGATCTTCGA CATCGGGCTG
GAGGGCAAGA TGCTGGTCGC GGCCTTCCTG TCGGCGGCCA TGGCGGCGAT CACCGGCTCG
GTCTGGATCG GGCTCTTTGC CGGCGTCTTC GCGGCGCTGC TCTTCTCGGC GATCCACGGG
CTGGCCTCGA TCACCTTCCG GGGCAACCAG CTGATCTCCG GCGTGGCGCT GAACTTCCTT
GCCGCGGGGT TGACCGTCCT GATCGCACAG AGCTGGTTCA GCCAGGGCGG CCGCACCCCC
TCGCTCATCG GCGGTGCGAG GTTCGAGCCG ATCACCCTGC CCTTCGCCGA AGCGCTGCAG
AACGTCCCCA TCCTCGGGCC GATCTACTAT GAACTGATCT CGGGTCACAC GATCCTGGTC
TATGTCGCCC TGCTCGCGGT GCCTGCAACC TGGTATATCC TCTTTCGCAC CCGGTTCGGC
CTGCGCCTGC GCGCGGTGGG CGAGAACCCG GCGGCCGTGG ACACGGCGGG GATCTCGGTC
GTGGGCCTGC GCTACGCCGC CGTGGCGATT TGCGGGCTGC TCTGCGGTCT CGCGGGGGCG
TATCTGGCCA CGGGCCTCTC GGCGGGCTTT GTCAAGGACA TGACCGCCGG GCGCGGCTAC
ATCGCGCTGG CGGCGCTGAT CTTCGCCAAA TGGCGGCCCT GGTACGCGCT CATGGCCTGC
CTGCTCTTCG GCTTTCTCGA AGCCATCGCC AACCGGTTCC AGAACATCGA GATCCTGAGC
ATCCCGATCC CGGTCCAGCT GATGCAGGCC CTGCCCTATA TCCTGACGGT CGTGATCCTC
GCCGGTTTCG TGGGCAAGGC GATCCCGCCC CGCGCCGGCG GCGAGCCCTA TGTCAAGGAA
CGCTGA
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| Protein sequence | MDFATLLQVL DSTIRLATPL LLACLAGLFS ERAGIFDIGL EGKMLVAAFL SAAMAAITGS
VWIGLFAGVF AALLFSAIHG LASITFRGNQ LISGVALNFL AAGLTVLIAQ SWFSQGGRTP
SLIGGARFEP ITLPFAEALQ NVPILGPIYY ELISGHTILV YVALLAVPAT WYILFRTRFG
LRLRAVGENP AAVDTAGISV VGLRYAAVAI CGLLCGLAGA YLATGLSAGF VKDMTAGRGY
IALAALIFAK WRPWYALMAC LLFGFLEAIA NRFQNIEILS IPIPVQLMQA LPYILTVVIL
AGFVGKAIPP RAGGEPYVKE R
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