| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2845 |
|---|
| Symbol | |
|---|
| ID | 5710696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3002943 |
|---|
| End bp | 3003572 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641268771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534179 |
|---|
| Protein GI | 159045385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.85185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCG AGTATCTGCC CGCCCTGCTG GCCGCCTGGG GCGTGCAACT GGTCGGCGTG
ATGTCCCCGG GCCCGTCGGT GGCCCTGCTG CTGGGCGTCG GCACGGCGCA AGGGGCACGG
GCGGCCCTGC TGACCTGCGC CGGGATCGCG TCCGCCTCGC TGGTGCTGTC GGTCGCGACG
GTGCTCGGGC TGACCGTGAT CTTCGCCCAA CTGGCCGAGG CGATGGTGGT GCTGAAAATG
GTCGGCGCGG CCTATCTGGC CTGGCTCGCC TGGGGCGCGG TCCGGCGCGC GGTGACCCTG
CCGCCCCTGC CCGCCCCCGT GGCCACCCGC GCCACCGCCA CCCGGCTGGC GCGCCGGGGC
TTCCTGTTGC AGGTCTCCAA CCCCAAGGCG ATCCTGTTCT GGATCGCCAT CGCCAGCTTG
GGCGGCCTCG CCGGTGCGCC CTGGCCCGTC ATCCTGATCT TCGTCGCGGG CGCCTTCCTG
AATTCGTTTC TCGGCCACGC CGCCTGGGGC CTCGTTTTCG CCGCCCCGCC CATGCGCCGC
GCCTACCTGT CCGGGCGCCG CTGGGTCGAA GGCGCGCTGG CCGGCTTTTT CGCCTTCGCC
AGCTTCAAGC TGCTGACCAC GAGGATCTGA
|
|---|
| Protein sequence | MMAEYLPALL AAWGVQLVGV MSPGPSVALL LGVGTAQGAR AALLTCAGIA SASLVLSVAT
VLGLTVIFAQ LAEAMVVLKM VGAAYLAWLA WGAVRRAVTL PPLPAPVATR ATATRLARRG
FLLQVSNPKA ILFWIAIASL GGLAGAPWPV ILIFVAGAFL NSFLGHAAWG LVFAAPPMRR
AYLSGRRWVE GALAGFFAFA SFKLLTTRI
|
|---|
| |