| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2844 |
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| Symbol | |
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| ID | 5710695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3001828 |
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| End bp | 3002946 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268770 |
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| Product | integral inner-membrane protein |
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| Protein accession | YP_001534178 |
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| Protein GI | 159045384 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.746022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGA TGCCGAAATG GGCCGACGCG CTGCTGGTGC CGCTGCTCAG CGTCCTGATC
GCCTTCGTGA TCTCCGGCCT GGTGATCATC GCCATTGGCG AGAACCCGTG GGAGGCGCTC
AAGCTCATGG TCACCGGCGC GCTCGGCTCG ACCTATGGCT GGGGCTATAC CCTTTATTAC
GCGACGAATT TCATCTTCAC CGGCCTCGCG GTCGCCGTGG CCTTCCACGC GCGGATGTTC
AACATCGGCG GCGAGGGGCA GGCGATGCTG GGCGGGCTCG GCGTGGCGCT GATCTGCCTC
TATATCCCCT GGCCGCACTG GGCCATGGCG CTGCCCGCGG CGGTGATCGG CGGCGCGGTG
TTCGGCGCGG CCTGGGCGGC GATCCCGGCC TACCTGCAAG CCAAGCGCGG CAGCCATATC
GTGATCACCA CGATCATGTT CAACTTCATC GGCGCGGCGG TGCTGAACTA CCTGCTGGTC
AACCAGCTGC GCCCGCAAGG CAGCATGGAC CCCTCCACCG CGAAATTCCC CGAGGCCACG
CATCTGCCCA CGCTCCACGA CCTGCTGGCC CCGCTGGGCA TCGAGTTCTC CCGCGCCGCG
CCGGTCAATA TCAGCCTGCT GGTGGCGCTG GTGGCGTGTT ACCTGTTCTG GTTGCTGATC
TGGCGGACCA AGCTCGGCTA CGAGATCCGC GCCTATGGCA ATTCCGAGAC GGCGGCTGTC
TATGCCGGGA TCTCGCCCAC CAAGATCATC ATGGTGGCGA TGCTGATCTC CGGCGGGCTG
GCGGGGATGA TGGCGATCAA CAACGTCATG GGCGAGGCCG AGCGGCTGGT CCTGAACGCG
GTCGAAGGCG CGGGCTTCAT CGGCATCGCC GTGGCGCTCA TGGGCCGCTC GCACCCGGTG
GGCGTGCTGC TGGCGGCGAT CCTCTTCGGC TTTCTCTACC AGGGCGGGGC GGAACTGGCG
CTGTGGACCA ACATCCCGCG CGAGCTGATC GTGGTGATCC AGGCGCTGGT GATCCTGTTC
ACCGGGGCGC TGGACAACAT GGTCCGGATG CCCATCGAAA AGGCCTTCCT CGCCGCGCAC
CGCCGCAAGA CCGCCCGCCG GTCGGAGCCC GCGGAATGA
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| Protein sequence | MDRMPKWADA LLVPLLSVLI AFVISGLVII AIGENPWEAL KLMVTGALGS TYGWGYTLYY
ATNFIFTGLA VAVAFHARMF NIGGEGQAML GGLGVALICL YIPWPHWAMA LPAAVIGGAV
FGAAWAAIPA YLQAKRGSHI VITTIMFNFI GAAVLNYLLV NQLRPQGSMD PSTAKFPEAT
HLPTLHDLLA PLGIEFSRAA PVNISLLVAL VACYLFWLLI WRTKLGYEIR AYGNSETAAV
YAGISPTKII MVAMLISGGL AGMMAINNVM GEAERLVLNA VEGAGFIGIA VALMGRSHPV
GVLLAAILFG FLYQGGAELA LWTNIPRELI VVIQALVILF TGALDNMVRM PIEKAFLAAH
RRKTARRSEP AE
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