| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2842 |
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| Symbol | |
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| ID | 5710693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2999169 |
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| End bp | 3000158 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268768 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001534176 |
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| Protein GI | 159045382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0285337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC TGCAGAAACT GCTCGGCGCG ACCGGCGCAC TGGCGCTCTC GACCGGAGCC
GCGCTGGCCG AACCCGCCCT GATCTTCGAC CTCGGCGGCA AGTTCGACAA ATCCTTCAAC
GAGGCCGCCT TCAACGGCGC CCAGCGCTGG GTTCAGGAGA CCGGCGGCAC CTACCGCGAG
ATCGAGCTGA CCTCCGAGGC CCAGCGCGAG CAGGCCCTGC GCCGCTTCGC CGAGGCCGGC
AACAACCCCA TCGTGATGAC CGGCTTCGCC TTCGGCAACG TGCTGGGCGA GGTCGCGCCC
GACTACCCCG ACACCAGCTT CGCGATCATC GACATGGTCG TGGACCAGCC CAACGTGCGC
TCGGTCGTGT TCAACGAGCA CGAGGGCAGC TACCTCGTGG GCATGATGGC CGCCATGGCG
TCCGAAACCG GCACCGTCGG CTTCATCGGG GGCATGGATA TCCCGCTGAT CCGCAAGTTC
GCCTGCGGCT ACGCCCAGGG CGTGAAGGCC GCCAACCCCG ACGCCACCGT GATCCAGAAC
ATGACCGGCA CCACGCCCGC GGCCTGGAAC GACCCGGTCA AGGGCGGTGA GCTGACCCGC
GCCCAGATCA GCCAGGGCGC CGACGTGGTC TATGCGGCCG CCGGTGGCAC CGGCGTCGGC
GTGCTGCAGA CCGCGGCCGA CGAGGACATC CTGTCGATCG GCGTGGACAG CAACCAGAAC
TACCTGCACC CGGGCGAGGT TCTGACCTCG ATGATGAAGC GCGTCGACAA CGCGGTCTTC
GCCGCCATGT CCGACGGCCC GGGCTTCGAG ACCGGCATCC GTGTCCTGGG TCTCGCCGAA
GACGGCGTGG GCTATGCGCT CGACGAGTTC AACGCCGAGC TGGTCACCGA CGAGATGCAG
GCCGCCGTGG AAGAGGCCAA GGCCAAGATC ATCGCCGGCG AGATCACCGT GCATGACTAC
ATGTCCGACA ACACCTGCCC GGTGATGTAA
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| Protein sequence | MTILQKLLGA TGALALSTGA ALAEPALIFD LGGKFDKSFN EAAFNGAQRW VQETGGTYRE
IELTSEAQRE QALRRFAEAG NNPIVMTGFA FGNVLGEVAP DYPDTSFAII DMVVDQPNVR
SVVFNEHEGS YLVGMMAAMA SETGTVGFIG GMDIPLIRKF ACGYAQGVKA ANPDATVIQN
MTGTTPAAWN DPVKGGELTR AQISQGADVV YAAAGGTGVG VLQTAADEDI LSIGVDSNQN
YLHPGEVLTS MMKRVDNAVF AAMSDGPGFE TGIRVLGLAE DGVGYALDEF NAELVTDEMQ
AAVEEAKAKI IAGEITVHDY MSDNTCPVM
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