Gene Dshi_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2840 
Symbol 
ID5710691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2997915 
End bp2998571 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content76% 
IMG OID641268766 
Productpeptidase M22 
Protein accessionYP_001534174 
Protein GI159045380 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000908418 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCCCG TTCTGGCCTT CGATACAGCG GCCGCGCATT GCGCGGCTGC TTTGCTGTGC 
GGCGACCGCA TTGTCGCGAT CCGGCACGAG CCCATGGCCA AGGGCCAGGC CGAACGCCTG
CTCCCCCTGC TCGAAGAGCT GCTGGCCGAG GCCGGGATCG GCTGGCGCGA CCTCGCGGCC
CTCGGCGTCG GGATCGGCCC AGGCAACTTC ACAGGCATCC GCATCTCCGT CGCCGCCGCG
CGCGGCATCG CCCTTGCCCG GGGCATTCCC GCCATGGGCG TCTCGGGGCT GGAGGCGCAG
GTCTACGGCA CGGGCCGCGC GGCCCTGGCC AGCCTCGATG CCCGCCGGGA TGCCGCCTAT
GTCCAGGCCT TTGACGCGAT GGGCCAGCCG CTGGCCCCGC CGGATATGGG CGATCCCGCC
ACCCTGGCCC TGCCGGACCT GCCCGCACCG CCGCTCTGCC TCGGCCCGGC CGCCGCGGCC
CTTGCCCTGC GCACCGGCGG CACCTCCGGC ACACCTGCCA CACCGCAGGC CGAGGCCATC
GCGCGCATCG CCGCCGCCCG GGCGCAGCCC GCCCTGCCGC CGCCCATCCC GCTCTATATC
CGGCCCGCCG ACGCTGCCCC GGCCAAACCG GCCCCGGCCC TGCTCCGCCC GCGATGA
 
Protein sequence
MDPVLAFDTA AAHCAAALLC GDRIVAIRHE PMAKGQAERL LPLLEELLAE AGIGWRDLAA 
LGVGIGPGNF TGIRISVAAA RGIALARGIP AMGVSGLEAQ VYGTGRAALA SLDARRDAAY
VQAFDAMGQP LAPPDMGDPA TLALPDLPAP PLCLGPAAAA LALRTGGTSG TPATPQAEAI
ARIAAARAQP ALPPPIPLYI RPADAAPAKP APALLRPR