Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2836 |
Symbol | trpS |
ID | 5710687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2994331 |
End bp | 2995356 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641268762 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_001534170 |
Protein GI | 159045376 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0141096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CTGCCAGCAG CTTCACCCCC CGGGTCTTTT CCGGCATCCA GCCCTCGGGC GGGCTGACGC TGGGCAACTA TCTCGGCGCG ATCAAACGCT TCGTGGACAT GCAGGACAGC GGCATCCAGA CCCTCTATTG CATGGTGGAC CTGCACGCGA TCACCGTCTG GCAGGACCCC GCCGCCCTGA CCCGGAACAC GCGCGAGCTG GCCGCGGGCT ATCTGGCCGC CGGGATCGAC CCCGCGCGCT CGATCCTGTT CAACCAGTCC CAGGTGCCGG AGCACGCGCA ATTGGGCTGG ATCTTCAACT GCGTGGCGCG CATGGGCTGG ATGGGCCGGA TGACCCAGTG GAAGGACAAG GCGGGCAAGA ACGCCGAGAA CGCGTCCTTG GGCCTTTTCG GCTACCCGGC GCTGATGGCC GCCGACATCC TGGTCTACCA CGCCACCCAT GTGCCCGTGG GCGAGGACCA GAAACAGCAT ATCGAGCTGA CCCGCGACAT CGCCGCGAAG TTCAACCATG ACTACGGCGT GGACTTTTTT CCCATGACCG AGCCGGTGAT CGAGGGCGCG GCGACGCGCG TGATGTCCCT GCGCGACGGC TCCAGGAAGA TGTCGAAATC CGACCCTTCG GACATGAGCC GGATCAACAT GACCGACGAT GCCGACGCCA TCGCCAAGAA GATCCGCAAG GCCAAGACCG ACCCCGAACC CCTGCCCGAG ACCGTCGAGG GGCTGAAGGA CCGCCCCGAG GCGCGCAACC TGGTGAACAT CTACGCCGCC CTGTCGGACC AGAGCGTCGA GGCGGTGATC GCCGCCCATG CCGGCGCGCA ATTCGGCACG TTCAAGCCCG CGCTGGTGGA CCTCGCCGTG GACAAGCTCG CCCCGATCTC CTCCGAGATG GCCCGGCTGA TGGACGATCC GGCCGAGATC GACCGGCTGC TGGGCAAGGG CGCGGCCCAG GCTCGCGAGA TCGCCACCCC GATCCTGCAA AAGACCTACG ACATCGTGGG CATGGTCCGC AGCTGA
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Protein sequence | MTEPASSFTP RVFSGIQPSG GLTLGNYLGA IKRFVDMQDS GIQTLYCMVD LHAITVWQDP AALTRNTREL AAGYLAAGID PARSILFNQS QVPEHAQLGW IFNCVARMGW MGRMTQWKDK AGKNAENASL GLFGYPALMA ADILVYHATH VPVGEDQKQH IELTRDIAAK FNHDYGVDFF PMTEPVIEGA ATRVMSLRDG SRKMSKSDPS DMSRINMTDD ADAIAKKIRK AKTDPEPLPE TVEGLKDRPE ARNLVNIYAA LSDQSVEAVI AAHAGAQFGT FKPALVDLAV DKLAPISSEM ARLMDDPAEI DRLLGKGAAQ AREIATPILQ KTYDIVGMVR S
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