| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2825 |
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| Symbol | |
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| ID | 5710676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2981199 |
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| End bp | 2982374 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641268751 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534159 |
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| Protein GI | 159045365 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.727578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAA CGGCAGCGAT CATCGGCAGC GGCAGGATCG GGAGCGGGTG GGCCGCGCGG
TTTCTCTTGT TCGGCTGGCA TGTGCGGGTT TTCGATGCGG ACCCGGGGGC GCAGGCGCGG
CTGACGCAGG TGATCGAGGC GGCCCGGACG AGCCTGCTGG GGCTCTATGA TACGCCCCTG
CCCCCACCCG GACGGCTCAG CCAGCACGGG AGCATCGCCG AGGCCGTGGC GGGCGCGGTC
TGGGTGCAGG AGAGTGTGCC CGAGGACCTG TCCCTGAAAC GGGAGGTCGT GCGGGAGGTG
CAGGCCCATG GCCCGGAGGC GATCGTCGCC TCCGCCGCCT CGGACATCCC GCTGGAGGCA
TTGCGAGAGG GCGCCGCCCG CCCGGAGCGG GTCGTGATCG CGCGGGCGGT CGCGCCGGTC
TACCTGCTGC CGCCGGTGGT GCTCGAGGCG CGCGATGCCG CCTGCGGGGC CCAGGCCGAG
GCGGTTCTGC GCGGCATCGG GATGACGCCT CTGCAGGGGG AGCAAACCCT CGGCCCGGAG
GGCACGCAGA TCGCCGCCGC CCTGGGGCTG GCCGCGGAAC AAGGCCCCGC GACAGATGCC
CGGCGCGACG CAACCCTCGT GGGCGTCCTG CGCGCCCTGA AGGCCGAAGG CCGGGGCGTC
GGGGCCGCAT TCGCCGCGAC CGACCGCGCC CGGATGCCCG CGCCGGGGGC CGAGAGCGCG
CCGCTGCTCA CGGCGGCCCG CGTGGTGCCC GCGGATTGGG CGGATTACAA CGGACACATG
ACCGAGGCAC GGTATCTGCA CGCCTTCGGC AATGCCACCG ACAGATTCAT GGAACTGATC
GGGGTGGACG CGGCCTATCT CGCGTCGGGG GGCAGCTTCT TCACCGCCGA AACCCATATC
CGGCATCTGG GCGAGATGCG GATCGGCGCG GCATTCGAGA TCCGGACCAC CTGCCTCGCC
GGGGCGGGCA AGCGGATGCA TCTGTGGCAC GAGATGCGCT GCGACGGGCG GCTGGTGGCC
ACGGGGGAGC ATATGCTGAT CCATGTCAGC CTGCGGACCC GCCGCCCGGC CCCTCCGGCC
GCGCCGGTGG CGGCCAACCT GGCGCGCATC GCCGCCGCCC ATGCCCGGCT CGCCCGGGCC
GAGGGGGTGG GCCGGGCCAT CGGCGATCCG CGCTGA
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| Protein sequence | MDRTAAIIGS GRIGSGWAAR FLLFGWHVRV FDADPGAQAR LTQVIEAART SLLGLYDTPL
PPPGRLSQHG SIAEAVAGAV WVQESVPEDL SLKREVVREV QAHGPEAIVA SAASDIPLEA
LREGAARPER VVIARAVAPV YLLPPVVLEA RDAACGAQAE AVLRGIGMTP LQGEQTLGPE
GTQIAAALGL AAEQGPATDA RRDATLVGVL RALKAEGRGV GAAFAATDRA RMPAPGAESA
PLLTAARVVP ADWADYNGHM TEARYLHAFG NATDRFMELI GVDAAYLASG GSFFTAETHI
RHLGEMRIGA AFEIRTTCLA GAGKRMHLWH EMRCDGRLVA TGEHMLIHVS LRTRRPAPPA
APVAANLARI AAAHARLARA EGVGRAIGDP R
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