| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2818 |
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| Symbol | |
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| ID | 5710669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2974910 |
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| End bp | 2975632 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268744 |
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| Product | HAD-like hydrolase |
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| Protein accession | YP_001534152 |
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| Protein GI | 159045358 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.564979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCGTG CCATCATATT CGACAAGGAC GGCACGCTGT TCGACTTCCA CGAAACGTGG
AGCGGCTGGG CCGCCGATGC GCTGCTTCAT CTCGCCGGGG GCGACGGGGC GCTGGCGATG
CGGCTGGCCG ATGCGGTGGG CTATGACCTG ATGCTGCGGC AGTTCCATCC CGACAGCCCC
GCGATCGCCG GAACCAGCGC CGAGATCGCC GTCCTGCTCA CACCCCACCT GCCGGAGCGG
GAGGAAGAGG ACGTGCTGCT GGAGCTTCAG GCCCGCGCCA ACACCGTGAC CCTGGCCGAG
GCCGCGCCGC TGCCGCCGCT GATGGACTGG CTCGCCGCGC GTCACCTGCT CCTTGGGCTG
GCCACCAACG ATTCCGAGGA AGGCGCGCGC GCCCATCTGG GCGACGCGGG CGTTCTGGAC
CATTTCGACC TGGTGCTCGG CTATGACAGC GGCTTCGGCG CGAAACCCGA CCCGGGCATG
TTGCTCGCCT TCTGCGACCA GTTCGGCCTG GCCCCCCACG AAGTGGCCAT GGTGGGCGAC
AGCCTACACG ACCTGCGCGC CGGGCGCGCG GCGGGGATGC GCACCATCGG CGTGCTCTCC
GGCGTGGCCC CCGCCGAAGA GCTGGCGCCC ATGTCCGACC GCGTTCTGCC CCATGTGGGC
CACCTGCCGG ATTGGGTGGG TGAACAACGC CTGCCGGTCC GGGCCCGCCA GGCGCTGGCC
TAG
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| Protein sequence | MLRAIIFDKD GTLFDFHETW SGWAADALLH LAGGDGALAM RLADAVGYDL MLRQFHPDSP
AIAGTSAEIA VLLTPHLPER EEEDVLLELQ ARANTVTLAE AAPLPPLMDW LAARHLLLGL
ATNDSEEGAR AHLGDAGVLD HFDLVLGYDS GFGAKPDPGM LLAFCDQFGL APHEVAMVGD
SLHDLRAGRA AGMRTIGVLS GVAPAEELAP MSDRVLPHVG HLPDWVGEQR LPVRARQALA
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