| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2817 |
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| Symbol | |
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| ID | 5710668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2973240 |
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| End bp | 2974799 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268743 |
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| Product | trimethylamine methyltransferase |
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| Protein accession | YP_001534151 |
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| Protein GI | 159045357 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5598] Trimethylamine:corrinoid methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.322933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATG ACGCAACCCC GAGGCGCAAG CGCAGCGGTG GCCGGGCCGC CAATGCCCGC
CGCATCCGCG CCCATGCGAT CGAACAGCTG CCCTTCCACG TCCCCCGAAA CCCCGACGCG
CCCACCGAAC CGCTCGCCCC CGAAGGGGTC GCCGCGATCC ACGACACCGC CATGCGCGTG
CTCGAAGAGA TCGGCATCGC CTTCCTGAAC GCCGAAGCGC TGGAGATCTT CCGCGAGGCC
GGCTGCCACG TGACCGGGGA GCTGGTCCGC ATGGACCGCC ATTTCGTTCT GGAGATGCTG
TCCCGCGCGC CTGCGCAATT CACCCTCACC CCCCGCAACC CGGACCGCGA GATCACCATC
GGCGGCCAGC ACATGGTGTT CGTCAACGTC TCGTCGCCGC CGAATTATTG GGACATGGAA
ACCGGAAAGA CCCCCGGCAC GCGGGCGCAA TGCCGCAACC TGCTCAAGCT GTGCCAGTAT
TTCAACTGCA TCCATGTTGT GGGCGGCTAC CCGGTCGAGC CGGTGGATGT CCACGCCTCT
GTGCGCCACC TCGATGTGCT CTTTGACAAG CTCACCCTGA CCGACAAGGT CGCCCATGCC
TACAGCCTCG GCAAGGAACG GGTCGAGGAC GTGATGGAGA TGGTGCGCAT CGCGGGCGGG
CTGACGGAGG CGGAATTCGC CGCCAGGCCG CACATGTATA CCAACATCAA CTCCACCTCG
CCGCTCAAGC ATGACCAGCC GATGATCGAC GGCGCCCTGC GCTGCATCCG GCGGGGACAG
GCGCTGATCG TGACGCCCTT TACCCTTGCC GGGGCCATGG CCCCGGTAAC CCTCGCGGGG
GCGGTGGCGC AATCGGTGGC CGAGGCGCTC GCCGCCATCG CGCTGGCGCA ATACGTCCGG
CCCGGCTGCC CGGTGGCGCT GGGCACCTTC ACCTCGAACG TGGACATGAA ATCCGGCGCG
CCCGCCTTCG GCACCCCGGA ATACATGCGT GCCACCCAGA TGACCGGCCA GATGGCCCGG
TTCTACGGCC TGCCGATGCG CGCCAGCGGG GTCTGCGCCG CCAACGTGCC CGATGGGCAG
GCGATGTGGG AGACGTCCAA TTCCCTGTGG TCCGCGGTGC AGTCCGGGGC CAACATGGTC
TACCACGCCG CCGGATGGCT CGAAGGCGGC CTGATCGCCA GCCCCGAGAA GTTCATCATG
GATTGCGAAA TGCTCCAGCA GATCGCGCGC TATTTCAGCC CCGATCTGAC CGCCACCACC
CCCGACGATC TCGCCTTCGA CGCCATGGCA GAGGTCGGTA CCTCGGGCCA TTTCTTCGGG
ATCCAGCACA CCCAGGACCG CTACGAGACC GCCTTCTATC AGCCCTTCCT GTCGGACTGG
CGCAATTTCG AAGCCTGGGA ACGGGATGGC GCCACCTGGA CGGTCGCGCG CGCCCACCGG
ATCTACAAGG AGATCCTGAC CGAGTTCACC CCGCCCCCCA TGGACCCCGC CATCCGCGAG
GAACTGAGCG ATTTCGTCGC CCGCCGCAAA GCCGAAGGCG GCGCGCCCAC GGATTTCTGA
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| Protein sequence | MANDATPRRK RSGGRAANAR RIRAHAIEQL PFHVPRNPDA PTEPLAPEGV AAIHDTAMRV
LEEIGIAFLN AEALEIFREA GCHVTGELVR MDRHFVLEML SRAPAQFTLT PRNPDREITI
GGQHMVFVNV SSPPNYWDME TGKTPGTRAQ CRNLLKLCQY FNCIHVVGGY PVEPVDVHAS
VRHLDVLFDK LTLTDKVAHA YSLGKERVED VMEMVRIAGG LTEAEFAARP HMYTNINSTS
PLKHDQPMID GALRCIRRGQ ALIVTPFTLA GAMAPVTLAG AVAQSVAEAL AAIALAQYVR
PGCPVALGTF TSNVDMKSGA PAFGTPEYMR ATQMTGQMAR FYGLPMRASG VCAANVPDGQ
AMWETSNSLW SAVQSGANMV YHAAGWLEGG LIASPEKFIM DCEMLQQIAR YFSPDLTATT
PDDLAFDAMA EVGTSGHFFG IQHTQDRYET AFYQPFLSDW RNFEAWERDG ATWTVARAHR
IYKEILTEFT PPPMDPAIRE ELSDFVARRK AEGGAPTDF
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