| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2814 |
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| Symbol | |
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| ID | 5710665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2969763 |
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| End bp | 2970803 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268740 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534148 |
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| Protein GI | 159045354 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.10848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC CGACGAAACC GCAACAGGTT CTGTGCCTGT CCCGCGATGC GCTCGACACG
CTGATGCCCC TCCATGTCTG GGTCGGTCCC GCGGGCGACA TCCTGCAATG CGGCCGCACT
TTGCAGAAAC TCCTGCCGGA CACGCAGATC GCGGGCTCGC ATTTCTTCGA CCATCTGGAG
GTTGTGCGCC CGCGCAGGGT CACCCGGCTG GAGCAGTTGC TGCGCATGAA TGGGGCCCAG
CTCAAGCTGC GCGTCAAGGA GGAGCCGAGC ATTCCGCTCA AGGGCGTGGT CGTGGCCCCG
CCGGACGGAA ACGGTGCCTT TCTCAACCTC TCCTTCGGCA TCTCGATCCA GGATGCGGTG
CGCCGCTTCG ATCTCAGCCT GACGGATTTC GCCGCCTCCG ATCTGGCCGC CGAGGCGCTC
TACCTGATCG AGGCGAACTC CGCCGCGATG AGCGCCTCCA AGAACCTGGT GGCGCGCCTG
CAAGAGGCCA AGACGGTCGC CGAAAGCCGC GCGCTGACCG ACACGCTGAC CGGGTTGCAC
AACCGCCGGG CCATGGACCT GACATTCGAG CAATTGCTCG CCAATCCGCC CCGGGACGGC
TTCGGCCTGA TGCTGATCGA CCTGGATTAC TTCAAGTCGG TCAACGACAC GCTCGGCCAT
GCGGCGGGGG ACATGGTGCT GCTCGAAGTG GCCCGCATCC TGCGCGAGGA AACCCGGTCG
GAGGATTTCT CGTTCCGGGT GGGCGGCGAC GAGTTTGTGC TCGTCCTGCG CAACTGCAAT
GATCTGGGCC TGATGACCCG GGTTGCGGAC CGCATCATCG CGCGGCTCGA AGAGCCGTTC
TATTACGACG GCAAGCCCTG CCGGATCTCG GCCAGCATCG GGATCACGAT CTCGGAATTC
TATGACCCGG TGGAAATCGA CAAGATGCTG TCGGATGCGG ACGAGGCGAC CTACGCCTCC
AAGAACCGCG GCCGGGCGCA GCACACGATC TACCGGCCGG CACCGCCGCC GGGCCCGCCC
CGGTCGCAGG ATCTGCACTG A
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| Protein sequence | MTAPTKPQQV LCLSRDALDT LMPLHVWVGP AGDILQCGRT LQKLLPDTQI AGSHFFDHLE
VVRPRRVTRL EQLLRMNGAQ LKLRVKEEPS IPLKGVVVAP PDGNGAFLNL SFGISIQDAV
RRFDLSLTDF AASDLAAEAL YLIEANSAAM SASKNLVARL QEAKTVAESR ALTDTLTGLH
NRRAMDLTFE QLLANPPRDG FGLMLIDLDY FKSVNDTLGH AAGDMVLLEV ARILREETRS
EDFSFRVGGD EFVLVLRNCN DLGLMTRVAD RIIARLEEPF YYDGKPCRIS ASIGITISEF
YDPVEIDKML SDADEATYAS KNRGRAQHTI YRPAPPPGPP RSQDLH
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