Gene Dshi_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2811 
Symbol 
ID5710662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2967772 
End bp2968284 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID641268737 
Producthypothetical protein 
Protein accessionYP_001534145 
Protein GI159045351 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.222867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC TGAAAACACT CGCGATTGCC ATGACCGTTG CCGCCGGTGC GGCGGGGGCG 
GCCAGCGCCC AGGACGACAG CGCCTTTGTC GAGTTCAAGG TGCTCAAGCC CGAACTCGCG
ATGGCGGCGG CCACCGCGGC GATGGAGCAC TGCCGCGCGG GCGGCTACCA GGTTGGCGTG
ACCGTGGTCG ACCGGTTCGG CGTGCCGCAG GCCTTCGTGC GCGACCGGTT CGCGGGCGCC
CATGTCTGGG AGACCGCCAC GCGCAAGGCC TGGACCGCCG TGAGCTTCCG GAGCGGCACG
ACCGAGCTCG ACGCCGCCAC CAAGCCCGGC ACGCTCGCCG AGGGCATCCG CCATATCAGC
CAGGCCCTGC CCCTGGGCGG TGGGCTGATG ATCGAGGAGG GCGGCGGGTC GCTGGTGGGC
GGGATCGGCG TGTCCGGCGC GCCGGGGCCG GATATCGACG ATGAGTGCGC GCAGGCGGGA
ATTGACGCCA TCGCCGATGA GATTGCATTC TAG
 
Protein sequence
MNHLKTLAIA MTVAAGAAGA ASAQDDSAFV EFKVLKPELA MAAATAAMEH CRAGGYQVGV 
TVVDRFGVPQ AFVRDRFAGA HVWETATRKA WTAVSFRSGT TELDAATKPG TLAEGIRHIS
QALPLGGGLM IEEGGGSLVG GIGVSGAPGP DIDDECAQAG IDAIADEIAF