| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2804 |
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| Symbol | soxA1 |
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| ID | 5713704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2963655 |
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| End bp | 2964509 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268730 |
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| Product | diheme cytochrome c |
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| Protein accession | YP_001534138 |
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| Protein GI | 159045344 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.244051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC TGTCGCTCAA GGCCGCCTTC AGCATAGCTA CCGCGGTGAC AGCTTTCGGT
CTCGGCACCG CGGCCCATGC CATCGACGAG CTGGTGATCA ACGGCGAAGA AAAGCTGGTC
ACCGAAACCG CCGCCCCGGC GCACCTGGAA AACATGTCGA CCATCCGGTC CGGCTGGACC
TTCCGGACGG ATGAGACCAA GTCGCTCCAG ATGGACGATT TCGACAATCC GGGCATGATC
TTCGTCGACA AGGCGATCGA CGCCTGGAAC ACCGCCGAGG GTGCCGCGGA AAAGGCTTGC
GCCGACTGCC ACAGCGGTCC CGAGAGCATG AAGGGCCTGC GCGCCAAGCT GCCCAAGTGG
AACGAGGACG CCGGCGAAGT CTGGACCATG GAGATGTATG TCAACGACTG CCGCACCAAC
CGGATGGAGG CTGAGGCCTG GGACTGGAAC AGTGCCGACA TGCGCAACAT GACGGCCCTG
ATCGGCCTGC AATCGCGCGG AATGCCCATG GATGTGGCGA TCGACGGGCC CGCCCAGTCC
ACCTGGGAGA AGGGCAAGGA GATCTACTAT ACCCGCTACG GGCAGCTCGA ACTGGCCTGC
GCGAATTGTC ACGAGGACAA TTACGACAAC TACATCCGCG CCGACCACCT GAGCATGGGC
ATGACCAACG GCTTCCCGGT CTACCGGCTG AAACAGGCCG ACCTCGTGTC CCAGCACAAC
CGCTTCCGCG GCTGCATCCG GGATACGCGG GCCGAAACCT TCGGCATGGG CTCGCCCGAA
TTCATCGCGC TGGAGCTTTA CGTCGCCTCC CGCGGCAATG GCCTCTCGGT CGAAACCCCG
GCCGTGCGCA ACTGA
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| Protein sequence | MKTLSLKAAF SIATAVTAFG LGTAAHAIDE LVINGEEKLV TETAAPAHLE NMSTIRSGWT
FRTDETKSLQ MDDFDNPGMI FVDKAIDAWN TAEGAAEKAC ADCHSGPESM KGLRAKLPKW
NEDAGEVWTM EMYVNDCRTN RMEAEAWDWN SADMRNMTAL IGLQSRGMPM DVAIDGPAQS
TWEKGKEIYY TRYGQLELAC ANCHEDNYDN YIRADHLSMG MTNGFPVYRL KQADLVSQHN
RFRGCIRDTR AETFGMGSPE FIALELYVAS RGNGLSVETP AVRN
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