Gene Dshi_2798 details

Gene Information

• Locus tag: Dshi_2798
• Symbol: dtd
• ID: 5713698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 2956906
• End bp: 2957343
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 641268724
• Product: D-tyrosyl-tRNA(Tyr) deacylase
• Protein accession: YP_001534132
• Protein GI: 159045338
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1490] D-Tyr-tRNAtyr deacylase
• TIGRFAM ID: [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 0.358731
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGGCCC TGATCCAGCG GGTCACCGAG GCGTCGGTGC GCGTGGAGGG GGCGGTGATC 
GGGCGGACAG GGCCTGGGCT GCTGGTGCTG GTCTGCGGGA TGCCCGGCGA TACGGACCGG 
AGCGTGGCGG CACTCGCGGG CAAGATCGCG AAGCTGCGGA TCTTTCGCGA CGCGGAGGGA 
CGGATGAACC GGTCGCTGCT GGACGTGGGC GGCGGGGCGC TGGTGGTCAG CCAGTTCACC 
CTGGCGGCGG ACACCTCCCG GGGCAACCGG CCGGGGTTTT CCGCCGCCGC GCCGCCGAAA 
GAGGGCGAGA GGCTCTACGA GGCCTTCGCC GCGGCCCTGG CGGAGACCGG CGTGGCGGTG 
GAGACCGGGC GGTTCGGCGC GAATATGGCC GTGGCCCTGG TCAATGACGG GCCGGTCACG 
ATCTGGATGG AAGGGTAG 

 

Protein sequence

MRALIQRVTE ASVRVEGAVI GRTGPGLLVL VCGMPGDTDR SVAALAGKIA KLRIFRDAEG 
RMNRSLLDVG GGALVVSQFT LAADTSRGNR PGFSAAAPPK EGERLYEAFA AALAETGVAV 
ETGRFGANMA VALVNDGPVT IWMEG