Gene Dshi_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2796 
Symbol 
ID5713696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2955399 
End bp2955857 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID641268722 
Productheat shock protein 
Protein accessionYP_001534130 
Protein GI159045336 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.300285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.746249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGG GAGTGAGTCC AGCACAAAAG GAGGACAAGA TGGTCGAGAA ATCCCACGCC 
ACCGGCTTCT GGCCGAGCCT TGCCGATCCC TTCCGGACAA TGGGGTCGAA GCTCGCGGAA
TGGGTGGCCC CCGCATCCGA GGCCAGCGTC AAGGACACCG CCTACACCAT CCGCATGGAA
CTGCCCGGCG TGGCCGAAGA CGACGTGGAT CTCAGCGTCC ATGACGGCGT CGTCACCGTG
AAGGGCGAGA AGAAATCCGA ACGCGAGGAG AGCGGCGAGA CCTGGTACTT CTCGGAGCGC
CAGTATGGCA GCTTCTCGCG CAGCTTCCGC CTGCCGCCCG ATGCTGACGA AGAGGCCGTC
GCGGCCGAGA TGAAGGATGG CGTGCTGACC GTCAGCGTGG ACAAGAAAAG CCCCGAGAAG
ACCGGCGGCA CCCGCAAGAT CCAGATCTCC AGGGGCTGA
 
Protein sequence
MGAGVSPAQK EDKMVEKSHA TGFWPSLADP FRTMGSKLAE WVAPASEASV KDTAYTIRME 
LPGVAEDDVD LSVHDGVVTV KGEKKSEREE SGETWYFSER QYGSFSRSFR LPPDADEEAV
AAEMKDGVLT VSVDKKSPEK TGGTRKIQIS RG