| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2795 |
|---|
| Symbol | |
|---|
| ID | 5713695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2954277 |
|---|
| End bp | 2955392 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641268721 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001534129 |
|---|
| Protein GI | 159045335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.47046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.835559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AGACCACGGC CCCGGCCGAG CCTTCGATGG AGGAGCATCG CTTCCCCTGC
GAGGCCTGCG GCGCGGATAT GCGGTTCGAG CCGGGCGCGG ACAGGATGGT CTGCGATCAT
TGCGGGAACG TGGCCGAGAT CGAAGGGCTG GGCCCGTCGC CCTGGGGCAT CGCGGAGCAG
GACTACCGCG CCGCCCTGCG CCGCCCCGAC GGGCTGGAGC AGGAGGTCAC GCGGGTGCTG
TCCTGCCCCA ACTGCGCCGC GCAGATCGAG TTCTCGCCCG AGGTGCATGC CGCCGAATGC
CCCTATTGCG CAACGCCGGT GGTCACCGAC ACGGGCGCGC ACCGGCATAT CAAGCCGCAG
GCCATCGCCC CCTTCGTGCT GAGCGAAGAC GCCGCCCGAC GCGCCATGAC CGCGTGGCTC
GGACGGTTGT GGTTCGCGCC CAACGGGCTG GCGGCCTACG CCCGCAAGGG GCGGCGGATG
AGCGGCGTCT ATGCCCCGTT CTGGACCTAT GACGCGGCGA CCCGCAGCCG GTATTCGGGG
GAACGGGGCA CGGTCTATTA CACCACGCGG ACGGTGATGC GCGACGGCAA GCCGACCACG
GTGCGAGTGC AGAAGGTACG CTGGCGGCGG GTGTCGGGCG CGGTGGCGCG AGCGTTCGAC
GACCTGCTGG TGCTGGCGGC GCGCAGCCTG CCCAAGGGGC TGACCGATGC GTTGCCGCCC
TGGCGGCTGT CGGATCTCGT GCCGTACACG CCCGAGCTGA TCGCCGGGTT CCGGGCCGAG
GGCTACACCG TCGCGCTGGA GGACGGGATG GACGAGGCCC GCGCCGAGAT GGACCGGATG
ATCGCCCGCG ACGTGCGGTT CGATATTGGC GGGGATCGCC AGCGGATCCA CGGGATCGAA
ACGCAGATCT CGGACGTGAC CTTCAAGCAC ATCCTGCTGC CGATCTGGGT GGCGGCCTAC
AAGTACAACG GCAAGAGCTA CCGTTTCGTG GTCAACGGGC AGACCGGCAA GGTGGCGGGC
GAGCGGCCCT ATTCGATCTG GAAGATCGCC GGGGCGGTGG TGCTGGGCGC CCTTTTGGCG
GGCGCCCTGG GCTATGTCGC CGCGATGTCC GGCTGA
|
|---|
| Protein sequence | MSDETTAPAE PSMEEHRFPC EACGADMRFE PGADRMVCDH CGNVAEIEGL GPSPWGIAEQ
DYRAALRRPD GLEQEVTRVL SCPNCAAQIE FSPEVHAAEC PYCATPVVTD TGAHRHIKPQ
AIAPFVLSED AARRAMTAWL GRLWFAPNGL AAYARKGRRM SGVYAPFWTY DAATRSRYSG
ERGTVYYTTR TVMRDGKPTT VRVQKVRWRR VSGAVARAFD DLLVLAARSL PKGLTDALPP
WRLSDLVPYT PELIAGFRAE GYTVALEDGM DEARAEMDRM IARDVRFDIG GDRQRIHGIE
TQISDVTFKH ILLPIWVAAY KYNGKSYRFV VNGQTGKVAG ERPYSIWKIA GAVVLGALLA
GALGYVAAMS G
|
|---|
| |