| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2794 |
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| Symbol | |
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| ID | 5713694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2953140 |
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| End bp | 2954270 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268720 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534128 |
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| Protein GI | 159045334 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.10969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.809001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCT TCGATTTCCT CTCCGGTCAG TTCATCGACG TGATCCACTG GACCGACGAC
ACCCGCGACA CGATGGTGTG GCGGTTCGAG CGGCAGGGCC ACGAGATCAA GTACGGCGCC
AAGCTGACCG TGCGCGAGGG CCAGTCGGCG GTGTTCGTGC ACGAGGGGCA GCTGGCGGAT
GTGTTCACGC CGGGGCTCTA CATGCTCGAG ACCAACAACA TGCCGATCAT GACCAGTCTG
CAGCACTGGG ATCACGGCTT TCGCAGCCCG TTCAAGTCCG AGATCTATTT CGTCAACACG
ACGCGGTTCA ACAACCTCAA ATGGGGCACC AAGAACCCGA TCATGCTGCG CGATCCGGAG
TTCGGGCCGG TGCGGATCCG GGCCTTCGGG ACCTATTCGG TGCGCGTGGT GGACCCGGCG
CGGTTCCTGT CGGAGATCGT GGGCACCGAT GGCGAGTTCA CCATGGATGA GATCAGCTTC
CAGATCCGCA ACATCATCGT GCAGGAATTC AGCCGGGTGA TCGCGGGCGC GGGCATTCCG
GTGCTGGACA TGGCCGCCAA CACCGCCGAG CTGGGCAAGG GGGTGGCCAC GGCGATCTCC
GAGACCATCG CGGGCTACGG GCTGTCCCTG CCGGAGCTTT ACATCGAGAA CATCTCGCTA
CCCCCGGCGG TGGAGACGGC GCTCGACAAG CGGACCTCGA TGGGTCTGGT GGGCGATCTG
GGCAAGTTCA CGCAATACTC GGCCGCCGAG GCGATGACGG CCGCCGGCAA GGCCGGGGGC
GACAGTGGCA TGGGCGCGGG CCTGGGGGCC GGCATGGGCA TGGCCATGGG CGCGCAGATG
GCCCAGGCCG GGCCCTGGGG CGCGCGCCCT GCCCCGGCAC CTGCGGCGGC CACCCCGGTC
GCGCCGCCGC CCCCGCCGGT GGAGCATGTC TGGCACATCG CCGAGGGCGG CCAGACCAAG
GGCCCGTTTT CCAAGGCCGA TCTGGGGCGC ATGGCCGCCG AGGGCGGGCT GACCCGCCAG
ACCCATGTCT GGACGCCCGG GCAGGACGGC TGGATGCGGG CAGAGGATGT CACCGAGCTG
GCGCAGCTTT TCACCATTCT GCCGCCCCCG CCCCCGCCGC CGGGCGCGTA A
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| Protein sequence | MSIFDFLSGQ FIDVIHWTDD TRDTMVWRFE RQGHEIKYGA KLTVREGQSA VFVHEGQLAD
VFTPGLYMLE TNNMPIMTSL QHWDHGFRSP FKSEIYFVNT TRFNNLKWGT KNPIMLRDPE
FGPVRIRAFG TYSVRVVDPA RFLSEIVGTD GEFTMDEISF QIRNIIVQEF SRVIAGAGIP
VLDMAANTAE LGKGVATAIS ETIAGYGLSL PELYIENISL PPAVETALDK RTSMGLVGDL
GKFTQYSAAE AMTAAGKAGG DSGMGAGLGA GMGMAMGAQM AQAGPWGARP APAPAAATPV
APPPPPVEHV WHIAEGGQTK GPFSKADLGR MAAEGGLTRQ THVWTPGQDG WMRAEDVTEL
AQLFTILPPP PPPPGA
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