Gene Dshi_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2783 
Symbol 
ID5713683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2943475 
End bp2944113 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content75% 
IMG OID641268709 
Producthypothetical protein 
Protein accessionYP_001534117 
Protein GI159045323 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGC TGGTGGTGCT GCATTACACC GCGATGGCGG ATGCGCAGGG GGCGGCGGAC 
TGGCTCTGCG CGCCCCGGGC GCAGGTCTCG GCCCATTACG TGATCGGCCG GGACGGGGCG
GTGATGCGGC TGGTGCCGGA GCATCTGCGC GCCTGGCACG CGGGGGCGGG GGCCTGGGGC
GGCTGCACGG ATGTGAATTC CGCATCGATC GGGATCGAGC TGGACAATGA CGGGACCAGC
CCGTTCAGCG CGCCGCTGAT GGACGCGCTG GAGGGGCTGC TGGGCGATAT ACTCACGCGA
CATGGCATCC CGCGCAAAGG GGTGATCGGG CATTCCGACC TCGCCCCGGG CCGCAAGATC
GACCCCGGCC CGCGGTTCGA CTGGCGGCGG CTGGCGCGGC GGGGGCTGTC GATCTGGCCC
GAGGGGGCGG CGGCGGGCGC GGCGCCGGAT CCTGCGCGTT TCGCAGCGGA CCTCGCCCGG
TTCGGGATGA CGGCGGAGGT GGACGCGGAG ACCCGGCTGG CGGCCTTCCG GGCGCGGTTC
CGGCCCGGGG CGACGGGGCC ACTGGCGCCC GAGGACATGG GGCTTGCGGC GGACCTGGCC
GCGCGCTGGC CCGTTGACCC GCCGCCTGTC TCGGGCTAG
 
Protein sequence
MPRLVVLHYT AMADAQGAAD WLCAPRAQVS AHYVIGRDGA VMRLVPEHLR AWHAGAGAWG 
GCTDVNSASI GIELDNDGTS PFSAPLMDAL EGLLGDILTR HGIPRKGVIG HSDLAPGRKI
DPGPRFDWRR LARRGLSIWP EGAAAGAAPD PARFAADLAR FGMTAEVDAE TRLAAFRARF
RPGATGPLAP EDMGLAADLA ARWPVDPPPV SG