Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2783 |
Symbol | |
ID | 5713683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2943475 |
End bp | 2944113 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641268709 |
Product | hypothetical protein |
Protein accession | YP_001534117 |
Protein GI | 159045323 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGCGGC TGGTGGTGCT GCATTACACC GCGATGGCGG ATGCGCAGGG GGCGGCGGAC TGGCTCTGCG CGCCCCGGGC GCAGGTCTCG GCCCATTACG TGATCGGCCG GGACGGGGCG GTGATGCGGC TGGTGCCGGA GCATCTGCGC GCCTGGCACG CGGGGGCGGG GGCCTGGGGC GGCTGCACGG ATGTGAATTC CGCATCGATC GGGATCGAGC TGGACAATGA CGGGACCAGC CCGTTCAGCG CGCCGCTGAT GGACGCGCTG GAGGGGCTGC TGGGCGATAT ACTCACGCGA CATGGCATCC CGCGCAAAGG GGTGATCGGG CATTCCGACC TCGCCCCGGG CCGCAAGATC GACCCCGGCC CGCGGTTCGA CTGGCGGCGG CTGGCGCGGC GGGGGCTGTC GATCTGGCCC GAGGGGGCGG CGGCGGGCGC GGCGCCGGAT CCTGCGCGTT TCGCAGCGGA CCTCGCCCGG TTCGGGATGA CGGCGGAGGT GGACGCGGAG ACCCGGCTGG CGGCCTTCCG GGCGCGGTTC CGGCCCGGGG CGACGGGGCC ACTGGCGCCC GAGGACATGG GGCTTGCGGC GGACCTGGCC GCGCGCTGGC CCGTTGACCC GCCGCCTGTC TCGGGCTAG
|
Protein sequence | MPRLVVLHYT AMADAQGAAD WLCAPRAQVS AHYVIGRDGA VMRLVPEHLR AWHAGAGAWG GCTDVNSASI GIELDNDGTS PFSAPLMDAL EGLLGDILTR HGIPRKGVIG HSDLAPGRKI DPGPRFDWRR LARRGLSIWP EGAAAGAAPD PARFAADLAR FGMTAEVDAE TRLAAFRARF RPGATGPLAP EDMGLAADLA ARWPVDPPPV SG
|
| |