Gene Dshi_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2776 
Symbol 
ID5713675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2938108 
End bp2939067 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content71% 
IMG OID641268701 
Productputative alcohol dehydrogenase 
Protein accessionYP_001534110 
Protein GI159045316 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCT TTCGCACCCA TGCCCATGAT GCCCCCCCCG CCCTCGAAGA CATCCCCGTC 
CCCGATCCCG GCCCGGGGGA GTTGCGCCTG CGGATCGCGG CCTGCGGGCT GAATTTCGCC
GACCTTCTGA TGGCCAGGGG CCAGTACCAG GAGCAGCCGC CCCTGCCCCT CACCCTGGGG
ATGGAGGTCG CAGGCACCGT GGACGCGCTC GGCCCCGACA CGACCGGGCC GGCGCCGGGC
ACCCGCGTCG CGGTGTTCGG CGGGCAAGGC GGGCTGGCCA AGTACGGCGT CTTTCCGGCG
GCCCGCTGCG TCCCGCTGCC CGACGGCATG CCGGAGACCG AGGCGGCGGG CTTCCAGATC
GCCTATGGCA CCTCCCACCT CGCGCTGAGC CACACCGCAC GGCTGCAACC GGGCGAGACC
CTGCTGGTGC TCGGGGCTGC GGGCGGCGTC GGGCTGACGG CGGTGGAAAT CGGCAAGCTC
ATGGGCGCCA CCGTCATCGC CAGCGCCCGC GGCCCCGCGA AACTCGACCA GGCGCGCAAG
GCCGGGGCCG ACCACCTGGT CGACAGCGAC ACCGACGACC TGCGCGAGGC GGTCAAATCC
CTGGGCGGCG CGGACGTGGT CTATGACCCG GTGGGCGGGG CGGCCTTCAC CGAGGCGCTC
CGCGCCTGCA AGCCCGAGGC GCGTATGCTG TTGATCGGCT TTGCCTCCGG CGATCTGCCC
GAGATCAAGC CCAACCACCT GCTGGTCAAG AATGTCTCGG TGCAGGGCTT TTACTGGGGC
GGATTTCTCA ACTTCAACCC GACCGCCCTC ACCGACAGCC TGGCGCAGCT GTTCGACTGG
TACGCCCAGG GCCGCATCAA ACCCCATGTC AGCCACGTCC TGCCGCTGGA GAAAGCCGCC
GACGGGCTCG ACCTGCTGCG CAGCCGTCGC TCCACCGGCA AGGTCGTCAT CACCCCCTGA
 
Protein sequence
MRAFRTHAHD APPALEDIPV PDPGPGELRL RIAACGLNFA DLLMARGQYQ EQPPLPLTLG 
MEVAGTVDAL GPDTTGPAPG TRVAVFGGQG GLAKYGVFPA ARCVPLPDGM PETEAAGFQI
AYGTSHLALS HTARLQPGET LLVLGAAGGV GLTAVEIGKL MGATVIASAR GPAKLDQARK
AGADHLVDSD TDDLREAVKS LGGADVVYDP VGGAAFTEAL RACKPEARML LIGFASGDLP
EIKPNHLLVK NVSVQGFYWG GFLNFNPTAL TDSLAQLFDW YAQGRIKPHV SHVLPLEKAA
DGLDLLRSRR STGKVVITP