| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2753 |
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| Symbol | |
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| ID | 5713652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2914929 |
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| End bp | 2916218 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268678 |
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| Product | TRAP dicarboxylate transporter |
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| Protein accession | YP_001534087 |
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| Protein GI | 159045293 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.580382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0302374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCT GGTTCCTGCC GCTGTTCCTG CTGTTCCTGA TGATCGGCTT GCCGGTCTTT
TTCGGCCTGC TTGCAGCCCC CGGTCTGCTG CTGTGGCTGA ACGGGCAGGA GCGGGACATC
ACCCTGCTTT ATCGGAATGT CTATAACGGG ATGGACAGCT TTCCGCTGAT GGCGATCCCG
TTCTTCATGC TGGCAGGCGA GTTGATGAAC CGGGGCGGGA TCACGTTGCG GCTGGTGGAG
TTTGCCCAGG CCCTGATGGG GCATTTCCGG GGCGGACTGG CCCATGTGAA CATCCTCAGC
TCGATGCTGT TCGCGGGGCT CTCGGGCTCT GCGGTGGCGG ACACCTCGGC GCTGGGCTCG
ATGTTGATCC CGGCGATGGA GAAGCAGGGC TATACCCGCC GGTTTGCCGC CGCGATCACC
GCCGCAAGCT CGGTGATTGG GCCGATCATC CCGCCCTCGG GGATCATGAT CATCTATGCC
TATGTGATGG GGGAGAGCGT CGCGGCCCTG TTTTTGGCAG GGATCGTGCC CGGTATCCTC
GTGGGTGTCG GCCTGATGGG GGTCGTGAAA CTGATGGCGG ACAAGTACGA CTTCCCCGTC
GCATCGGCCA AGACAACCTG GGGCCAGCGG GGGCAGGCCA GCCTGAAGGC GTTCTTCCCG
CTGATGACGC CGGTGATCAT CCTGGGCGGT ATCCTCGCGG GGGTGTTCAC CCCGACCGAG
GCTGCGGCGG TGGCGGTGGC CTATGCGCTG ATCATCGGGT TCTTCGTGAT GCGGACGCTG
AAGGTCTCGG ACCTGCCGGA TATCCTGGGT CGCGCCGGGA TCACGTCGGC GGTGGTGCTG
CTCCTGGTGG GGGCGGCGAT GGCGTTCAAG ACGGTGGTGA GCCTGTCCTA CGCGCCGCAG
ATCATGGCGG ATTTCATGCT GAGCCTGTCG GAGAACCCGC TGATCCTGCT GTTGCTGATC
AACCTGTTGC TGTTCGTGGT GGGAATGTTC CTCGATGCGG GGCCGGCGAT CATCATCCTC
GGCCCGATCC TCGGCCCGAT CTTCGTCGAT CTGGGGGTCG ATCCGATCCA TTTCGCAATC
ATCATGTCCG TGAACCTGAC CGTGGGGCTG GCCACGCCGC CCATGGGGCT TGTCCTGTTC
GTGGCAAGCT CGGTCTCGGG CGAACGGGTC GAGCGCATCG CCAAGGCGAT CCTGCCCTTC
CTGGCGGTGG AGATCCTGGT GATCTTCCTG ATCACCTATT TCCCCGCGAT TTCCATGACC
ATTCCGCGGC TCACCGGCTT TGCGCAGTGA
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| Protein sequence | MLIWFLPLFL LFLMIGLPVF FGLLAAPGLL LWLNGQERDI TLLYRNVYNG MDSFPLMAIP
FFMLAGELMN RGGITLRLVE FAQALMGHFR GGLAHVNILS SMLFAGLSGS AVADTSALGS
MLIPAMEKQG YTRRFAAAIT AASSVIGPII PPSGIMIIYA YVMGESVAAL FLAGIVPGIL
VGVGLMGVVK LMADKYDFPV ASAKTTWGQR GQASLKAFFP LMTPVIILGG ILAGVFTPTE
AAAVAVAYAL IIGFFVMRTL KVSDLPDILG RAGITSAVVL LLVGAAMAFK TVVSLSYAPQ
IMADFMLSLS ENPLILLLLI NLLLFVVGMF LDAGPAIIIL GPILGPIFVD LGVDPIHFAI
IMSVNLTVGL ATPPMGLVLF VASSVSGERV ERIAKAILPF LAVEILVIFL ITYFPAISMT
IPRLTGFAQ
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