| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2752 |
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| Symbol | |
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| ID | 5713651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2913824 |
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| End bp | 2914882 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268677 |
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| Product | TRAP dicarboxylate transporter |
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| Protein accession | YP_001534086 |
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| Protein GI | 159045292 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0920496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAA CCACCCTGAA GGCGCTTCTG GCCGGAGCGA TGCTCCTGTC CGCGCCGCTG
GCGGCCACGG CGCAGGAATA TACCCTGCGC GCCACCGCCA ATTCCAACGA GAACGACGAG
GATTACGACG GGCTCGTGGT GTTCAAGAAC TACGTCGAGA GCGCGTCGAA CGGGGCCATC
GCGGTGGAGC TGTTCATCGG CACGCAGCTG TGTTCGAACG GGGCGGAGTG CCTGCAAGGG
GTCGCCGACG GGTCGATCGA CATCTATATC TCGACCTCCG GCGGTGCGTC GGGGATTTTT
CCCTATGTTC AGGTGCTTGA CCTGCCCTAC CTGATGGCGG ACGACCGGAT CGCCGAGGCG
GTTCTGGCGG GCGATTTCAC CCGCAAGGTG CGCGAGATGG CGCTGGAGGA TTCCGGCGGG
ATGATCCGGC TGATGACCAT CGGCAATACC GGCGGCTGGC GCAACTTCGC CAACACCCAG
CGCCGGATCG CGGCACCCTC GGACATGGAG GGGCTGAAGA TCCGCACCGT GGTGGCCGAT
CTGCCGCAGG AACTGGTGCG CGTGCTGGGC GCCGCGCCCA CCCCGATCCC GTGGCCGGAG
CTGTTCACCT CGCTGCAGAC CGGCGTGGTC GAGGGGTCCA AGAACGGCAT CACCGATATC
ATGGGGATGA AATTCCCCGA TGCGGGTCTG CAATACCTGA CCCTGGACGG GCACGCCTAT
ATGGGTGCGC TGTGGTGGAT GAACAACGAG CGGTTCCTGT CCATGCCGGA GGATCTGCGC
AGGGTCGTGG TGGATGGGTT CTACGCGTTG CAGCAGGCGA CCTTTGCCTC GCCCAAGCGC
AAGTCGATCC CGGCCTATGA GGAGTTCGTC GCCGGGGGCG GGGACCTTTA TGTGCCCACG
CCCGAAGAGA AGGCGGCATT CAAGGAGGCC GCGGCCCCAG TGTTTGACTG GTTCAAGGCC
AATGTCGGGC GCGGGGAAGA GGTGTTCAAC GCGTTGAACG AGGCCGTTGC CGAGGCCGAG
GCCGAGGTCA ACGCGGCGCG CGACGCCGAC TTGAATTGA
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| Protein sequence | MFKTTLKALL AGAMLLSAPL AATAQEYTLR ATANSNENDE DYDGLVVFKN YVESASNGAI
AVELFIGTQL CSNGAECLQG VADGSIDIYI STSGGASGIF PYVQVLDLPY LMADDRIAEA
VLAGDFTRKV REMALEDSGG MIRLMTIGNT GGWRNFANTQ RRIAAPSDME GLKIRTVVAD
LPQELVRVLG AAPTPIPWPE LFTSLQTGVV EGSKNGITDI MGMKFPDAGL QYLTLDGHAY
MGALWWMNNE RFLSMPEDLR RVVVDGFYAL QQATFASPKR KSIPAYEEFV AGGGDLYVPT
PEEKAAFKEA AAPVFDWFKA NVGRGEEVFN ALNEAVAEAE AEVNAARDAD LN
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