| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2731 |
|---|
| Symbol | |
|---|
| ID | 5713630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2893456 |
|---|
| End bp | 2893779 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641268656 |
|---|
| Product | ferredoxin-6 |
|---|
| Protein accession | YP_001534065 |
|---|
| Protein GI | 159045271 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00573481 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.020314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA TCACCTACGT GGAACACAAC GGCACCGAGC ATGTGGTTGA CGTGGCCAAT
GGCCTGACCG TGATGGAAGG CGCGCGGGAC AACAACATTC CCGGCATCGA GGCCGATTGC
GGCGGCGCCT GTGCGTGTTC GACCTGCCAT GTCTATGTCC ATCCCGACTG GGTCGGCAAG
CTGCCGGGCA AGGAAGCGAT GGAAGAAGAC ATGCTCGATT TTGCCTATCA GCCGGACCCG
GTCCGGTCGC GCCTGACCTG CCAGATCAAG GTGTCCGAGG CGCTGGACGG GCTCGTGGTC
CAGATGCCCG AAAAGCAGAT CTGA
|
|---|
| Protein sequence | MAKITYVEHN GTEHVVDVAN GLTVMEGARD NNIPGIEADC GGACACSTCH VYVHPDWVGK
LPGKEAMEED MLDFAYQPDP VRSRLTCQIK VSEALDGLVV QMPEKQI
|
|---|
| |