Gene Dshi_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2730 
Symbol 
ID5713629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2892698 
End bp2893456 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID641268655 
Producthypothetical protein 
Protein accessionYP_001534064 
Protein GI159045270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0392858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0235796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCC GGGCGCCGCG TCGCCCGTGG CGCCCATGGC ACCGGATCGC CCGCGGCGCG 
CTGCAGGCCG CGGCGCTCTT GGCGGGCGTT GCAGGCGCTC CGGTGGCGGC GGAGGGCGTT
GTGAGCGCCC GGTATGCCGA GGAAACGACG CGCTATGCCC ATGGCGTGCT TGGAGATACC
ATCGAGTATG GCGCGCTGAT CCTCGACACC TCCGAGGGGC GCCGCTTGCG CATTGTCCTG
CCGGCGCATT CGGTGTTCGA GGATCTTGCG CCCCGGGTCG TGGATCTCGA TGACGATGGG
AAGGCAGAGG TGATCGTGGT CGAGAGCCAT CGCGATCTCG GCGCGCAACT GGCGATTTAT
GGCCCCGGTG GCAAGATCGC GGCGACCCCG CATATCGGTC AGACCAACCG CTGGCTGGCC
CCGATCGGGG CAGCAGACCT GGACGGGGAT GGGGCGATGG AGATCGCCTA TATCGACCGC
CCGCACCTGG CCAGGATCCT GCGTGTCTGG CGTTATGCGG AAGGGCGGCT GTCCGAGGTC
GCGCAACAGC CGGGTCTGAC CAACCATCGC ATCGGCGAGG ATTTCATCTC GGGCGGCATT
CGGGATTGCG GGTCGGGGCC GGAAATGATC GTGGCGCGGG GCGATTGGCG CGGTACGGTC
GCGCTTGACC TGATCGACGG GCAGCTCCGC GAGACCGCGT TGCCCTTTGT GCCTTCATCG
GACGGCTTCG CGCAAGCCCT GGGGTGTGCC GACCGCTGA
 
Protein sequence
MPTRAPRRPW RPWHRIARGA LQAAALLAGV AGAPVAAEGV VSARYAEETT RYAHGVLGDT 
IEYGALILDT SEGRRLRIVL PAHSVFEDLA PRVVDLDDDG KAEVIVVESH RDLGAQLAIY
GPGGKIAATP HIGQTNRWLA PIGAADLDGD GAMEIAYIDR PHLARILRVW RYAEGRLSEV
AQQPGLTNHR IGEDFISGGI RDCGSGPEMI VARGDWRGTV ALDLIDGQLR ETALPFVPSS
DGFAQALGCA DR