| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2709 |
|---|
| Symbol | msrB1 |
|---|
| ID | 5713608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2871102 |
|---|
| End bp | 2871578 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641268634 |
|---|
| Product | peptide methionine sulfoxide reductase |
|---|
| Protein accession | YP_001534043 |
|---|
| Protein GI | 159045249 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.755887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC GCCATTTCCT CGCCGCCACC GCCGGACTTC TCGCCAGCGC CGCGATCCTG
CCCCGCGGCC TGCAGGCCAG CGCCGGCCCG TTCGAGATCA CCCTGACCGA GGCGGAGTGG
CGCGCGCGCC TGACACCGGC GCAGTTCAAG GTGCTGCGCA AGGAGGGGAC CGAGCGCCCC
TTTACCAGCC CCCTGAACGA CGAGACCCGC GCCGGGATCT ATCACTGCGC GGGATGCGAC
CTGCCGGTCT ATCCGTCGAC CACCAAGTAT GACAGCGGCA CGGGCTGGCC GTCCTTCTGG
GCACCGCTGG AGGAGGCCAT CGGCACCAAG GCGGACCGCA AGCTGATCTA TCTGCGCACC
GAGGTCCATT GCCGCCGCTG TGGCGGGCAT CTGGGCCATG TGTTCGATGA CGGGCCGCAG
CCCACGGGCA AACGGCATTG CCTCAACGGG GTCGCGCTGA CGTTCAAACC GGCCTGA
|
|---|
| Protein sequence | MNRRHFLAAT AGLLASAAIL PRGLQASAGP FEITLTEAEW RARLTPAQFK VLRKEGTERP
FTSPLNDETR AGIYHCAGCD LPVYPSTTKY DSGTGWPSFW APLEEAIGTK ADRKLIYLRT
EVHCRRCGGH LGHVFDDGPQ PTGKRHCLNG VALTFKPA
|
|---|
| |