| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2704 |
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| Symbol | hemC |
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| ID | 5713603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2864136 |
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| End bp | 2865179 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268629 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001534038 |
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| Protein GI | 159045244 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATAC TGAGATCCCG CCGTGATGTC AGCTTGATGG CGCAAAATGG GTTGTCAAGT
CAAGTTGACA CTTATAGAGA TGCGACCATG ACTATCACAC TCCCGACCCC CGATTCACCC
TTGAAAATCG GCACACGCGG CTCGCTGCTC GCGCTGGCCC AGGCCCATGA GACGCGGGCC
CGTTTGTCGG CCGCGTTCGA CCTGCCGGAG GAGGCCTTCG AGATCGTGGT CATCAAGACC
ACCGGGGACC GGATCCAGGA CCGCTCGCTG AGCGAGATCG GCGGCAAGGG CCTGTTCACC
CGGGAAATCG AGGACGCCAT GCTGGACGGG AGCATCGACA TCGCGGTGCA TTCGATGAAA
GACATGCCCG TGGACACGCC CGCGGGACTG GCACTCGACA CCTACCTGCC GCGCGAGGAC
GTGCGCGACG CCTTCGTGAC GCTCGACGGG GGCACGCTGG CGGATCTGCC CGAGGGGGCC
GTGGTCGGGT CCAGTTCCCT GCGGCGGCGC GCGCAGCTGG CCCATCGGCG CCCGGACCTG
CAACTGGTCG AGTTCCGCGG CAATGTGCAG ACCCGGATGA AGAAACTCGG CGACGGCGTG
GCCCATGCGA CCTTTCTTGC CATGGCGGGG TTGAACCGGC TCGGCATGGA CGAGGTCCCG
CGCAGCGCGA TTGCGCCCGA AGACATGCTG CCCGCGGTCG CCCAGGGCTG CATCGGGATC
GAACGGCGCG CCGATGATCC GCGTGCGGCC GAAATGCTGG CCGCGATCCA CGACGGACCT
TCCGGACACC GCCTGGCCTG CGAGCGCGCC TACCTGTCGG CCCTGGACGG CTCGTGCCAG
ACCCCGATCG CCGGTCTGGC GGAGCTTGAC GGCGGCTCGA TTCACTTGCG TGCCGAAATT
CTGCGCCCCG ATGGCTCCGA AGTGCTGAGC GATTCCGAAA CCGCACCGGT GGAAGATGCC
GCAAAAATGG GCAGGGAGGT GGCCGAACGC CTCCGCGCCC GCGCGCCCGA CGGGTTTTTC
AGCTGGCTGA CGGCGCACGC GTGA
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| Protein sequence | MGILRSRRDV SLMAQNGLSS QVDTYRDATM TITLPTPDSP LKIGTRGSLL ALAQAHETRA
RLSAAFDLPE EAFEIVVIKT TGDRIQDRSL SEIGGKGLFT REIEDAMLDG SIDIAVHSMK
DMPVDTPAGL ALDTYLPRED VRDAFVTLDG GTLADLPEGA VVGSSSLRRR AQLAHRRPDL
QLVEFRGNVQ TRMKKLGDGV AHATFLAMAG LNRLGMDEVP RSAIAPEDML PAVAQGCIGI
ERRADDPRAA EMLAAIHDGP SGHRLACERA YLSALDGSCQ TPIAGLAELD GGSIHLRAEI
LRPDGSEVLS DSETAPVEDA AKMGREVAER LRARAPDGFF SWLTAHA
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