| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2701 |
|---|
| Symbol | |
|---|
| ID | 5713600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2861681 |
|---|
| End bp | 2862505 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641268626 |
|---|
| Product | putative hydrolase / acyltransferase |
|---|
| Protein accession | YP_001534035 |
|---|
| Protein GI | 159045241 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGA TCACCGCCCC CGACGGCACC CGCCTGCATT ACACCGACGA GGGGGCGGGC
ATCCCGCTGC TGTGCCTGTC GGGCCTGACC CGGACCACCC GGGATTTCGA CTACGCCCTG
CCCCACCTGA CCGGCGCGCG GGTGATCCGG ATGGACTTCC GCGGCCGGGG GCAAAGCGAC
TGGGCCGACC ACAGGTCCTA CACCCTGCAA CAGGAGGCCG CGGACGCGCT GCAACTGCTC
GACCATCTCG GGCTGGACAG GGCGGCGATC CTCGGCACTT CCCGCGGCGG GCTGATCGCC
ATGGGGCTGG GGCTGGGGGC GCGGGAGCGA CTGCTGGGCG TGTGCCTCAA CGATATCGGG
CCCGAGCTTG ACCCCAAGGG GCTGGAGGTG ATCATGGGAT ACCTGGGCCG CAACCCGGCC
TATGCCACCC ATGCCGAGAT GGCCGCGGCC ATGCCCGGGC TGATGACCGG CTTTGCCAAT
GTGCCCGCGA GCCGCTGGCT TCAGGAGGTG CAAAAACACT ATACCGAAAC CCCGCGCGGG
CTGCAGATCA CCTATGATCC GAAGCTCCGC GATGCCGTCG AGGAGGCCGG GGCCACGGCG
GCCACGGACC TCTGGCCGTT CTTCGAGGCG CTGGCGGGGC TGCCCGTGGC GGTGATCCGG
GGGGCGAATT CGGACCTTCT GAGTGCGGCG ACCGTGGCCG AGATGGCGCG CCGCCACCCG
GGCCTGATCG CCGCCGAAGT GCCGGACCGC GCGCATATTC CCTTCCTCGA CGAGCCGGAG
TCGGGCGCGG CCCTGCGCGC CTTTCTTGCC GCCGTGCCCC CATGA
|
|---|
| Protein sequence | MPQITAPDGT RLHYTDEGAG IPLLCLSGLT RTTRDFDYAL PHLTGARVIR MDFRGRGQSD
WADHRSYTLQ QEAADALQLL DHLGLDRAAI LGTSRGGLIA MGLGLGARER LLGVCLNDIG
PELDPKGLEV IMGYLGRNPA YATHAEMAAA MPGLMTGFAN VPASRWLQEV QKHYTETPRG
LQITYDPKLR DAVEEAGATA ATDLWPFFEA LAGLPVAVIR GANSDLLSAA TVAEMARRHP
GLIAAEVPDR AHIPFLDEPE SGAALRAFLA AVPP
|
|---|
| |