| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2696 |
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| Symbol | |
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| ID | 5713595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2856015 |
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| End bp | 2857679 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268621 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001534030 |
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| Protein GI | 159045236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.665567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCG CGCCTCCGAG AAACCCGACC TGCGCCCCCG AGAGAGACAT GACAATCCTT
CGCCTGTGCC TTGCAGTCCT GTTGACCTGC CTTGCCACGC TGACCGCCCC CGGCCCCGCC
GCGGCCCAGA GCTTCGAGGA CCTCGTCGCC GACCTGCCCG AGGGGAAGTT CGCCGAGCGC
AGCGCCGTAG TCGCCCGGCT TGCCGCCCTG GGCGATCCCC GGGCCGTGCC CGTGCTGGAG
GTGCTGCGCG ACGGCAATCT GCATGTGCTG AAATCCAACG GCGCCGTGGT CGCCATTCGC
GAGATCGCGG GCGATGACGT GGCCTACGAC GCGATCACCG GCGCGGAATA CGGCATCGTG
CCCCGGCGCG GCGCCACCAA GATCCGCGTC AATAACGGCC TGCGCCGGGA CATCCGGGCG
GCCATCGGCA CCCTGACCCT GCGGGCGCCG GACCCCGCCC TGCGCCTGGC CGCCGCCGAG
GCCGCTTTTT CCGCGCCGGA CCCCGACCAG CTGGACCTGT TGCGCGCCGC GCGGGAGGCC
GAGAACACCG GCACGGTGGC CGAGGCCCTG GACTACGCCA TCGCTGCCAC CCTGATCGCC
GCCGACGCCC CCGAAGCCGA GCAGGTCGCG GCCATCGAAG TCCTGCGCGA GATGGGCAAC
CAGGACGCGC TCTCGATCCT CACCCCGCTG CTGCAAGCCA CCAACCCGGT GCTGGCCCAG
GCCGCCGCCG ACGCGCTCGC CGCCATCGAG GCCAATCAAC GGTTCTGGAA CATGGCGCAG
AACGTGTGGT TTGGCCTCTC GCTCGGCTCG GTGCTGCTGC TGGCGGCCAT TGGGCTTGCG
ATCACCTTCG GGGTGATGGG CGTGATCAAC ATGGCCCATG GGGAGCTGGT GATGATCGGC
GCCTACACCA CCTTCTTCGT CCAGGAGATC ATCCGCACCT CCTTTCCGCA CCTCTTCGAC
TGGTCGCTCC TGATCGCGGC CCCCCTGGCC TTCGCGGTCG CGGGCGCCGT GGGCGTCGCG
ATCGAGCGGG GCTGCGTGCG CTTCCTCTAT GGCCGCCCGC TGGAGACGTT GCTGGCCACC
TGGGGGATCA GCCTGATCCT GCAACAGACC GTGCGCTCGA TCTTCGGGCC GAACAACCGC
GAGGTGGGCA ACCCCAGCTG GATGTCCGGC GCTTTCGAGG TGGGCCAGAT GACGATCACC
TACAACCGGC TGTGGATCCT GCTCTTTGCC CTGGCGGTCT TCGCGGTGCT CCTCTTCGTG
CTGAAGAAAA CCGCCATCGG TTTGCAGATG CGGGCAGTCA CGCAAAACCG CGCCATGGCG
GCCAACATGG GCATCCGCAC GGGCTGGGTC GATGCCATGA CCTTCGGGCT GGGCGCGGGC
ATCGCCGGGC TCGCGGGCGT GGCGCTGAGC CAGATCGACA ATGTCTCCCC GAACCTCGGG
CAGAGCTACA TCGTAGACAG CTTCATGGTC GTGGTCTTCG GCGGCGCCGG GAACATCTGG
GGCACGCTGG CGGCGGCCTT CAGCCTCGGG ATCGCCAACA AGTTCCTGGA GCCCTACGCG
GGCGCGGTGC TGGCCAAGAT CCTGGTGCTC GTGTTCATCA TCCTCTTCAT CCAGAAGCGG
CCCCGCGGGC TCTTCGCGGT GAAGGGCCGG GCGGTGGAGA ACTGA
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| Protein sequence | MRAAPPRNPT CAPERDMTIL RLCLAVLLTC LATLTAPGPA AAQSFEDLVA DLPEGKFAER
SAVVARLAAL GDPRAVPVLE VLRDGNLHVL KSNGAVVAIR EIAGDDVAYD AITGAEYGIV
PRRGATKIRV NNGLRRDIRA AIGTLTLRAP DPALRLAAAE AAFSAPDPDQ LDLLRAAREA
ENTGTVAEAL DYAIAATLIA ADAPEAEQVA AIEVLREMGN QDALSILTPL LQATNPVLAQ
AAADALAAIE ANQRFWNMAQ NVWFGLSLGS VLLLAAIGLA ITFGVMGVIN MAHGELVMIG
AYTTFFVQEI IRTSFPHLFD WSLLIAAPLA FAVAGAVGVA IERGCVRFLY GRPLETLLAT
WGISLILQQT VRSIFGPNNR EVGNPSWMSG AFEVGQMTIT YNRLWILLFA LAVFAVLLFV
LKKTAIGLQM RAVTQNRAMA ANMGIRTGWV DAMTFGLGAG IAGLAGVALS QIDNVSPNLG
QSYIVDSFMV VVFGGAGNIW GTLAAAFSLG IANKFLEPYA GAVLAKILVL VFIILFIQKR
PRGLFAVKGR AVEN
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