| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2688 |
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| Symbol | appC |
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| ID | 5713586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2848368 |
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| End bp | 2849762 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268612 |
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| Product | cytochrome bd-II oxidase subunit 1 |
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| Protein accession | YP_001534022 |
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| Protein GI | 159045228 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0249782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC TGATCCTGTC GCGCATCCAG TTCGGCGCGA ATATCTCGTT CCACATCCTG
TTCCCGACGA TCACCATCGC GCTCGGCTGG GTGCTGCTGT TCTTCAAGCT GCGCTTCCAG
GCCACCGGGG ACGGCAAATG GATGGAGGCG TATCGCTTCT GGGTGAAGGT CTTCGCCCTG
AGCTTCGCCA TGGGCGTGGT GTCGGGCATC ACCATGTCGT TCCAGTTCGG CACCAACTGG
CCGGGCTTCA TGGAGCATGT CGGGAACATC GCCGGGCCGC TTCTGGCCTA CGAGGTGATG
ACCGCCTTCT TCCTCGAAGC CGTGTTCCTG GGCATCATGC TCTTCGGGGT CAGCCGTGTG
CCGCCCTGGC TGCACACGCT GGCCACCTTC CTCGTGGCCT TCGGTACCAC CATGTCCGCC
TTCTGGATCC TGGTGCTGAA CAGCTGGATG CACACGCCCC AGGGGTACGA GATCCGCGAT
GGCGTGGCCT ATGCCACCAA CTGGCTGGAG ATCATCTTCA ACCCGTCCCT GCCCTACCGG
TTCAGCCATA CGTTGCTGGC CTCGGGCCTG ACGGTCGCCT TCCTGCTGGC GGGGCTGTCG
GCCTTCCGCT GGCTGCGCGG CGACCGCTCC GACGGCGTGC GCGCGGCGAT GCGCACGGGC
GTGACGCTGG GCGCGCTGCT GATCCCGGTG CAGATCTTCG TGGGCGACAT GCACGGGCTC
AACACGCTCG AACACCAGCC CGCCAAGGTC GCGGCGATGG AAGGACACTG GGACGGCGAC
AAGAGCCCGG TGCCGCTGGT GCTCTTTGCC CTGCCCAATG CCGAGACCCG CGAGAACGAT
TTCGAGATCG CCATCCCCTA TCTCGGCTCG CTGATCCTGA CCCATTCGCT CGACGGCAAG
ATCCCCGGCC TGAACGACTT CGTCACCGAG GACGGCGAGG TGCTGCATCC ACCCGTGGCC
AAGGTGTTCT GGTCGTTCCG GGTGATGGTC GCCACCGGCA TGGCCATGCT GGTGATGAGC
TGGGCCGCGA TGTGGTTCAT GCGCCGGGGC CGCGGCATCG AAGGCCTGCC CAAACCGATG
CTCTACGGCT TCGTCGCCAT GGGCTTTTCC GGCTGGATCG CCACGCTGGC GGGCTGGTAC
ACCACCGAGA TCGGCCGCCA GCCCTGGCTG GTGGATGGGG TGCTGCGCAC CGCCGACGCG
GTGGCGGACG TGCCCGCCGG CATGGTGCTG GGCACGCTTC TGGCCTATCT CGCGGTCTAC
GCGGCGCTGA TCTTCTGCTA TATCAGCGTG CTGACCTATC TCGCGGCCAA GGCGGCCAAG
GGCGAGCCCA CCCGCATCTT CGACACGCCC CGTTCGGGCG AGGCCGAAGT GCGCGCCATC
ACCCCGGCGG AGTAG
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| Protein sequence | MDTLILSRIQ FGANISFHIL FPTITIALGW VLLFFKLRFQ ATGDGKWMEA YRFWVKVFAL
SFAMGVVSGI TMSFQFGTNW PGFMEHVGNI AGPLLAYEVM TAFFLEAVFL GIMLFGVSRV
PPWLHTLATF LVAFGTTMSA FWILVLNSWM HTPQGYEIRD GVAYATNWLE IIFNPSLPYR
FSHTLLASGL TVAFLLAGLS AFRWLRGDRS DGVRAAMRTG VTLGALLIPV QIFVGDMHGL
NTLEHQPAKV AAMEGHWDGD KSPVPLVLFA LPNAETREND FEIAIPYLGS LILTHSLDGK
IPGLNDFVTE DGEVLHPPVA KVFWSFRVMV ATGMAMLVMS WAAMWFMRRG RGIEGLPKPM
LYGFVAMGFS GWIATLAGWY TTEIGRQPWL VDGVLRTADA VADVPAGMVL GTLLAYLAVY
AALIFCYISV LTYLAAKAAK GEPTRIFDTP RSGEAEVRAI TPAE
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