| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2682 |
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| Symbol | gcvT2 |
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| ID | 5713580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2842546 |
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| End bp | 2843631 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641268606 |
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| Product | aminomethyltransferase, glycine cleavage system T protein |
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| Protein accession | YP_001534016 |
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| Protein GI | 159045222 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.122455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.82644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGA AAACGCCGCT GCACCCCCTA CATCTTGAGT TAGGCGCAAA GATGGTGCCC
TTCGCCTGGT GGGAGATGCC CGTGCAGTAC CCCACGGGCA TCATGGCCGA GCATGCCGCC
TGCCGCGAAG GCGCCGCCCT GTTCGATGTC AGCCACATGT GCCAGATGGA GATCACCGGC
GACGACCCGG CCGCCGCCCT GGAGCGGCTG GTGCCCGGCG GCATCACCAG CCTCGCCCCC
GGGCAGGCGC GTTATACCCA GCTGACCACC GGGGCGGGGG GGATCTATGA CGACCTGATC
GTGACCCGCG ATCCCGGGGG GCTCTATGTG GTGGCCAACG CCTCCATGGC GGACCAGGAC
GTGGGCCTGC TGCGCGCGGG GCTGCCCGAT TGCACCCTTC GGGTCATCGA GGACCACGCC
CTGATCGCCG TGCAGGGCCC CGCGGCAGCC GCGCTGGTGG CCGGGCTGGT GCCCGCGGCG
GAGGATCTGC GCTTCATGCA GAGCGCGCAG GCGGCGTGGG ACGGACAGGA TCTGCGCCTG
TCGCGGCTGG GCTATACCGG CGAGGACGGG TTCGAGATCT CCCTGCCCGC CACCGCGGCG
GAGGCCTTCG CCCGGGCGCT GATCGCCGGG GGGGCCATGC CCGCCGGGCT GGGCGCGCGC
GACACCCTGC GGATGGAGGC GGGCCTGCCG CTTTACGGCC AGGATATCGA CCAGGGCACC
TCGCCGCCCG AGGCGGGGCT GGGGTTCTCG ATCCCGAAGC GCCGCCGCGC CGAGGGGGGC
TTCCCGGGTG CCGCGCGGAT CCTGGGCGAG CTGGCCGACG GTCCCGCCCG CCGGCTGGTC
GGCCTGCGCC CCGAGGGGCG CGCGCCCGTG CGTGCGGGCG TCGAGATCAC CGCGCCCGAC
GGCACACCGC TCGGCACCGT GACCAGCGGC GGGTTCGCCC CCACGCTCCA GGCGCCGATC
TCCATGGGCT ACGTGACCGC CAGCCACGCC GCCCCCGGCA CCGAGATCCA CGTGATCCTG
CGCGGCAAGC CCCAGCCCGC AACGGTCACC CCGCTCCCCT TCGTTCCGCA CCGCTATAAA
CGTTGA
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| Protein sequence | MLKKTPLHPL HLELGAKMVP FAWWEMPVQY PTGIMAEHAA CREGAALFDV SHMCQMEITG
DDPAAALERL VPGGITSLAP GQARYTQLTT GAGGIYDDLI VTRDPGGLYV VANASMADQD
VGLLRAGLPD CTLRVIEDHA LIAVQGPAAA ALVAGLVPAA EDLRFMQSAQ AAWDGQDLRL
SRLGYTGEDG FEISLPATAA EAFARALIAG GAMPAGLGAR DTLRMEAGLP LYGQDIDQGT
SPPEAGLGFS IPKRRRAEGG FPGAARILGE LADGPARRLV GLRPEGRAPV RAGVEITAPD
GTPLGTVTSG GFAPTLQAPI SMGYVTASHA APGTEIHVIL RGKPQPATVT PLPFVPHRYK
R
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