| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2678 |
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| Symbol | |
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| ID | 5713576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2835568 |
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| End bp | 2836272 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641268602 |
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| Product | ABC transporter |
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| Protein accession | YP_001534012 |
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| Protein GI | 159045218 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00869869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CCGTTCTGTC CCTGACCGAT GTGTCCCTGC GCCTGGATGG CAACGCGGGG
CCGGTGGATA TCCTGCATGA TATCTCGCTG AAGGTCGAAA CCGGGGAAAC TGTGGGGCTG
ATCGGGCCGT CGGGGTCTGG CAAGTCGTCT CTCCTCATGG TGCTTGGCGG GTTGGAGCGT
GCGTCTTCGG GGCAGGTGCT GGCGCTCGGC CATGACCTGA CCCGGCTCGA TGAAGACGCG
CTCGCCCGGT TCCGCAGGGA TCATATGGGC GTGGTGTTCC AATCCTTCCA CCTCATTCCG
ACAATGACCG CCCTGGAAAA CGTCGCCACC CCGCTGGAAC TGGCCGGCGC GGCAGACGCG
TTCGAACGGG CCGAGGCCGA ACTGGTCGCC GTGGGGCTTG CCGACCGGGT GCATCACTAC
CCGTCGCAGA TGTCCGGCGG CGAGCAGCAG CGCGTGGCGC TCGCCCGCGC CGCCGCCCCG
CGCCCGGCGC TGCTCCTGGC CGACGAGCCC ACGGGCAACC TCGATGGCAG CACCGGCGAG
GCGATCATGG ACCTTCTCTT CGGGTTGCGT GACCGGCACG GGGCGACCCT GGTTCTCGTG
ACCCATTCGC GCGAACTGGC CGCGCGCTGC GACCGGGTGG TCCGCCTGCG CGACGGCCGG
ATCGAGAGCG ACAGCGCCAC CGCCCCACGC GAGGCCGCGG AATGA
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| Protein sequence | MTDPVLSLTD VSLRLDGNAG PVDILHDISL KVETGETVGL IGPSGSGKSS LLMVLGGLER
ASSGQVLALG HDLTRLDEDA LARFRRDHMG VVFQSFHLIP TMTALENVAT PLELAGAADA
FERAEAELVA VGLADRVHHY PSQMSGGEQQ RVALARAAAP RPALLLADEP TGNLDGSTGE
AIMDLLFGLR DRHGATLVLV THSRELAARC DRVVRLRDGR IESDSATAPR EAAE
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