| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2676 |
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| Symbol | |
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| ID | 5713574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2832817 |
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| End bp | 2834847 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268600 |
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| Product | histidine kinase |
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| Protein accession | YP_001534010 |
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| Protein GI | 159045216 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00458174 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT GGCTGATCGA CCCGAATGAT ACGCTGGAGC AGCAGAACGC CAAGCTGCGC
CAGATCACCG GCGTGCTCAT GCGCCGGGTC GAACAGGATA CCGACCGCAC CGGTGTCGCC
TATCGCCAGT TCGAACGCGC CGCCCTGCTG GAGGACCAGG TCCGCCAGCG CACCGCCGAC
CTGGAACATG CGCTCGACCT TCTGAACGAA TCCAACGCGC GGCTGGCCGA GGCCAATCGC
GCCGCCGAGA GCGCGCGGGC GGACCTGTCC AGTGCGATCG AGACGATCCA GGAGGGCTTC
GCGCTCTTCA ACGCGCGCGA CGAGCTGGTG ATGTGCAACA GCCGGTTCGG AATGCACATG
CTCGATCTGC AGACCGAGCT GACGCCGGGG CTGAGCTTCG CGCGCTACGT GGAGCTGGTC
AGCCGCAGCA AGTACCTCGC CCTGCCCGAG GGGGTCGGCT CCGCGGACTG GGCCGCGCGA
CGCCTGAAAC GGCACCAGGA CAATCACGTG ATCTTCAACG TCCGCATGGT GCGCGACCGC
TGGAACAAGC GCGTCGGCAC CCTGCTGGCG CTGCCGCTGA ACCGGTTCCG CCTGGGCACG
CAGTTCCAGT CCCTGCTGGA GCGTTTCGAG GCCGAGCTGA GCTTCGAGTC CGAGGAAAAC
CGTGCGAACC TCTGGCGCTG GGTGATGCGC AAGACCAATC GCAAGCCGAT CAGCTTCGAG
GTCAAGCGCC GGGATGGCAT GATCCTCGAC GTCTTCGCCC AGGAGATGCC CGACAAGGGC
TTCGTGATCA GCTTCACCGA CGTGACCGCC GAACGCGAAG CCACCCGCAC CCTGTTCCAG
GTCAACGAGT TGCTGGAACA GCGGGTGATG GAGCGCACGC TGGAGCTGGA GGATGCGCTA
TCCTCGGCGG AGCGGGCCAA TGCCTCCAAA TCGCGCTTCG TGGCCGCCGC CAGCCACGAC
CTGCTGCAAC CGCTCTCGGC GGCCAAGCTC TATGTCTCGG CGCTGGACGG GCCGGAGACG
ACCGAGGCCA CGCGGGAGAT CGCCCACAAG GCCCACCGCG CCTTGCTCAG TGTCGAGAAC
ATCATCGACG CCCTGCTCGA CATCTCGAAA CTCGAAGCCG GCATGGCCGC GCTGGAGGTG
TCGTCGGTGC CGCTGAACAC GGTGTTCGAC GCCATCCGCG AACAATTCAG CCCGCTGGCT
GCCCAGAAAG GTTTGGAATT CAAGGTGATG CCCTGTGCGG TGGTGCTGGA ATCCGACCCA
TCCTACCTGC GCCGGATCGT GGCCAACCTG GTGTCCAACG CCATCCGCTA CACCGCCGAG
GGGCGGGTTC TGGTGGGGGC GCGGCGCAAC GGCAATTCCA TCCGGATCGA GGTCTGGGAT
ACCGGCCCCG GCATCCCCGA GGCCAAGCAG GACATCATCT TCCAGGAGTT CGAGCGCCTC
GATGCCAAGG CCAGCGCCTC CGAGGGGCTG GGGCTGGGCC TCGCCATCGT GGAGCGGGCC
TGCGCGCGGC TCGGCCACCC GCTGGGCCTG TGGTCGGTGA TGGGCCAGGG CTCGGGCTTC
TTCGTCAACG TCGCCCGGTC GATGCAACCG CACCTGACCC TGAACACCGG CCTGACCAAG
ATGAGCAGCG CGGGCCTTCA GGGCAGCGGG ATGATCGTGC TGCTTGTGGA GAACGATCTC
GACCTGCGCC GCGCCATGAC CCTGCTGCTC GAGAAATGGG ATATCAGCGT TCTGGACGTG
CACGGCGCCT CCGAGGCGGT CGAGCTGCTG GACGAGATCG AGATCGCGCC GGACGCCATG
CTGATCGACT ACCAGCTCGA CGGCGGGGAG AACGGGCTCG ACCTGATCCG GCAGGTGCAG
GCGCGCCATG GGGCGGTGCC CACGCGGCTG ATCTCGGCCA ACCGCTCGCC GGAGCTGCGG
GCGCGCTGCG CGGCGCAAAA CATCGAGCTG CTCAACAAGC CCATCGATGC CCGCACCCTG
GAGCGGTTCC TGACCGAAGC GCTGAAATCG GCGCGCGATT TCCGCGCCTA G
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| Protein sequence | MTDWLIDPND TLEQQNAKLR QITGVLMRRV EQDTDRTGVA YRQFERAALL EDQVRQRTAD
LEHALDLLNE SNARLAEANR AAESARADLS SAIETIQEGF ALFNARDELV MCNSRFGMHM
LDLQTELTPG LSFARYVELV SRSKYLALPE GVGSADWAAR RLKRHQDNHV IFNVRMVRDR
WNKRVGTLLA LPLNRFRLGT QFQSLLERFE AELSFESEEN RANLWRWVMR KTNRKPISFE
VKRRDGMILD VFAQEMPDKG FVISFTDVTA EREATRTLFQ VNELLEQRVM ERTLELEDAL
SSAERANASK SRFVAAASHD LLQPLSAAKL YVSALDGPET TEATREIAHK AHRALLSVEN
IIDALLDISK LEAGMAALEV SSVPLNTVFD AIREQFSPLA AQKGLEFKVM PCAVVLESDP
SYLRRIVANL VSNAIRYTAE GRVLVGARRN GNSIRIEVWD TGPGIPEAKQ DIIFQEFERL
DAKASASEGL GLGLAIVERA CARLGHPLGL WSVMGQGSGF FVNVARSMQP HLTLNTGLTK
MSSAGLQGSG MIVLLVENDL DLRRAMTLLL EKWDISVLDV HGASEAVELL DEIEIAPDAM
LIDYQLDGGE NGLDLIRQVQ ARHGAVPTRL ISANRSPELR ARCAAQNIEL LNKPIDARTL
ERFLTEALKS ARDFRA
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