Gene Dshi_2675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2675 
Symbol 
ID5713573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2831646 
End bp2832845 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content68% 
IMG OID641268599 
Producthypothetical protein 
Protein accessionYP_001534009 
Protein GI159045215 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0296571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCT CGCCGGAGAC CGCGGCGCAG CCCGTCGTGC AGGCCAGCGT GCTCTGCACG 
GACCCGGATC CGGTGGACAC GCTCTGCGCG GCCCTCGGCG CCGAGCCTCT CGCCCTCGTC
ATCCTGTTCG TCAGCCCCTC CACCGATTTC GGCGAGGTGA TCCGGGCCGC CAGCGCGCGG
TTCGGCGAGA CCCCCGTGCT GGCCTGCACC ACCGCGGGCG AGATTTCGGC CCAGGGGTAC
ACCGAGGACG AGATCGTCGC GGTCGGCCTG CCATCGCGGC ATTTCGCCAT CGAGACCATG
CTGATCGACA CGCTCGAAGA GATCGACTCC CAGGAATTGA TCGGGCGCAC GATCCGGCGG
CGGCAATCGC TGATGCGGCT TGCACCCGAC TGGCAGAACG AGTTCGCCTT CCTGATGATC
GACGGGCTGT CGCTGAAGGA GGATGAGCTG GCCTTCGGGC TGGCCACGGG GCTCGGTCCC
GTGCCGCTCT TCGGCGGGTC CGCCGGGGAC GGCGCGCGGT TCGAGGAAAC CTTCGTCGCG
CTCAACGGCA TCGCCTACCA GGACGCGGCG ATCGTCACCT TCGTGCGCAC CCGCTGCCCG
GTGCGGGTCT TCAGCCTCGA CCACCTGCGG CCCACGGACC GGCGGATGGT GGTGACCGGG
GCCGACCCGA GCCGCCGCAT CGTGCGCACG CTCAATGCCG CGCCCGCCGC CCGGGAATAC
GCCCGTATCC TGGGCAAGGA TCCCGAGCAG CTCGGCCCCT TCACCTTCGC CGCCCACCCG
GTGGTGGTCA CCATCGGCGG CACCCACCAT GTGCGCGCGA TCCAGCAGGT GACCGAACAG
GGCGACCTGG TGTTCTTTTC CGCCATCGAC GAGGGGCTGG TGCTGACCCT GGCCGAGCCC
GACCACCTGG TCGAGCATCT CGAACGGGAA TTCCAGGCCC TGTCGGCCGA GGTCAAACCG
GCCGCCATCA TCGCCTGCGA CTGCATCCTG CGGCGGCTGG AGGCCGGTCA GAAGCAGCTT
CTGGGCCGCA TGTCGAACAC GCTGGCCGAG CATTGCGTTG TCGGCTTTTC AACCTATGGT
GAACAACTGA ACGCAATGCA CGTGAATCAT ACCATGACCG GGGTGGCGAT CTATCCACCG
CCGCCGGAAG ATGGTGAGGC CGGGAGCCTG CATGACCGAC TGGCTGATCG ACCCGAATGA
 
Protein sequence
MLSSPETAAQ PVVQASVLCT DPDPVDTLCA ALGAEPLALV ILFVSPSTDF GEVIRAASAR 
FGETPVLACT TAGEISAQGY TEDEIVAVGL PSRHFAIETM LIDTLEEIDS QELIGRTIRR
RQSLMRLAPD WQNEFAFLMI DGLSLKEDEL AFGLATGLGP VPLFGGSAGD GARFEETFVA
LNGIAYQDAA IVTFVRTRCP VRVFSLDHLR PTDRRMVVTG ADPSRRIVRT LNAAPAAREY
ARILGKDPEQ LGPFTFAAHP VVVTIGGTHH VRAIQQVTEQ GDLVFFSAID EGLVLTLAEP
DHLVEHLERE FQALSAEVKP AAIIACDCIL RRLEAGQKQL LGRMSNTLAE HCVVGFSTYG
EQLNAMHVNH TMTGVAIYPP PPEDGEAGSL HDRLADRPE