| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2673 |
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| Symbol | exaA |
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| ID | 5713571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2828781 |
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| End bp | 2830547 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268597 |
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| Product | quinoprotein ethanol dehydrogenase precursor |
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| Protein accession | YP_001534007 |
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| Protein GI | 159045213 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0513715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGT TTATTGCCGC TGTAACCGCT GCCGTTGTCG CGACAGGCGC GGCCTACGCA
GAAGGCATCA CGGAACAAGA CCTGGCCAAT GACCAGGCGG ATACGAGTCG CGTGCTGACC
AACGGCATGG GCCGCCACCT GCAGCGCTAC TCGCCGCTCG AGACGCTCAA CAAGGACAAC
GTGGAAAACC TGGTTCCGGC CTGGGCCTTC AGCCTCGGCG GGGAAAAGCA GCGCGGACAG
GAAACTCAGC CGCTCATCTA TGACGGGATC ATGTACATCA CCGGCTCCTA CAGCCGCGTC
TATGCGATCG ACGTCGAGAC CGGCAAGGAG ATCTGGCAGT ACGACGCGCG TCTGCCCGAA
GGCATCCTGC CCTGCTGTGA CGTGATCAAC CGCGGCGGCG CCATCTATGG CGACAAGTTC
TACTTCGGCA CGCTCGATGC CCGCATCGTG GCGCTCGACC TGAAGACCGG CGACGTGGTC
TGGCGCAAGA AGATCGACGA TTACAAGGCG GGCTATTCCT ACACGGCCGC CCCGCTGATC
GTGAACGGCC TCGTGGTCAC CGGCAACTCC GGCGGCGAGT TCGGCATCGT CGGCGCGGTC
GAAGCCCGCG ACGCGGAAAC CGGCGAGCTG GTCTGGAAGC GTCCGGTGAT CGAAGGTCAC
ATGGGAGAGT TGAACGGCGA GCCGTCCACC ATGACCGGCA CGCTGAACGC GACCTGGCCG
GGCGACATGT GGAAAACCGG CGGCGGGGCG ACCTGGCTCG GCGGCTCCTA TGACGCGCGC
ACCGACACGC TGATCTTCGG CACGGGCAAC CCAGCGCCCT GGAACAGCCA CCTGCGCGGT
GCGGGCAAGC CGTCCGAGGA CGGAATGGGC GACAACCTCT ATGCCGCCTC GCGTCTCGGG
ATCGATCCGG CCACCGGCGA GATCAAGTGG CATTTCCAGA CCACCCCCCG GGAAGGCTGG
GACTTCGACG GCGTGAACGA AGTCGTCGCC TATGACGACC GCGAGGGCAA CCCGCGCCTG
GCAACCGCCG ACCGCAACGG CTTCTTCTAC GTGCTGGATG CCGCGGATGG CAGCTTCGTG
TCGGGCATGC CCTTCGTGGA GCAGATCAGC TGGGCCTCGG GCCTCGACGA GAACGGGCGT
CCGATCTTCG TGGAGGAAAA CCGTCCGGGC GATCCGGCCG AGGCCGCCGA CGGCAAGAAG
GGGGAGACGG TCTTCGCGGT TCCGGGCTTC CTGGGCGGCA AGAACTGGAT GCCCATGGCC
TACAGCCAGC GCACCGGCAA CTTCTACGTG CCCGCCAACG AATGGGGCAT GGATATCTGG
AACGAGCCGA TCACCTACAA GAAAGGGGCC GCCTATCTGG GCTCCGGCTT TACCATCAAG
CCGCTCTTCG AGGACCATAT CGGCGCGATC AAGGCGATCG ACCCGGACAC GATGGAAACC
AAGTGGGTCT ACAAGAACGA CGCACCGCTC TGGAGCGGCG TGATGACCAC GGCCGGTGGC
CTGGTGTTCT TCGGCACCCC GGAGGGCGAG TTCATCGCGC TCGACGACGA GACCGGCGAG
AAGCTCTGGT CCTTCCAGAC CGGCTCCGGC ATCGTCGGCC AGCCCATCAC CTGGGAACAG
GATGGGGAGC AGTATGTCTC GGTCATCTCC GGCTGGGGCG GCGCGGTTCC GCTCTGGGGC
GGCGAAGTGG CCAAGAAGGT CAACTACCTC AACCAGGGGG GGATGCTCTG GACCTTCCGC
CTGCCCAAGC AGTACGCGGC CAACTAA
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| Protein sequence | MNRFIAAVTA AVVATGAAYA EGITEQDLAN DQADTSRVLT NGMGRHLQRY SPLETLNKDN
VENLVPAWAF SLGGEKQRGQ ETQPLIYDGI MYITGSYSRV YAIDVETGKE IWQYDARLPE
GILPCCDVIN RGGAIYGDKF YFGTLDARIV ALDLKTGDVV WRKKIDDYKA GYSYTAAPLI
VNGLVVTGNS GGEFGIVGAV EARDAETGEL VWKRPVIEGH MGELNGEPST MTGTLNATWP
GDMWKTGGGA TWLGGSYDAR TDTLIFGTGN PAPWNSHLRG AGKPSEDGMG DNLYAASRLG
IDPATGEIKW HFQTTPREGW DFDGVNEVVA YDDREGNPRL ATADRNGFFY VLDAADGSFV
SGMPFVEQIS WASGLDENGR PIFVEENRPG DPAEAADGKK GETVFAVPGF LGGKNWMPMA
YSQRTGNFYV PANEWGMDIW NEPITYKKGA AYLGSGFTIK PLFEDHIGAI KAIDPDTMET
KWVYKNDAPL WSGVMTTAGG LVFFGTPEGE FIALDDETGE KLWSFQTGSG IVGQPITWEQ
DGEQYVSVIS GWGGAVPLWG GEVAKKVNYL NQGGMLWTFR LPKQYAAN
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