Gene Dshi_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2665 
Symbol 
ID5713563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2822130 
End bp2823107 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID641268589 
Producthypothetical protein 
Protein accessionYP_001533999 
Protein GI159045205 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.320211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGA CCCTGACCGC CGCCGCCACC ACCGCCCTGC TGCTGGGCAC CACCGCCGCC 
CTCGCCTCGG GCGAGATCTG GGTGACCAAC GAAAAGGACG ACACGATCAG CGTGATCGAC
ATCGCCACCC TCGAAGTGGT CCGCACCATC GAGACCGGCG AGCGCCCGCG CGGCATCACC
TTCTCCAAGG ACTACTCCCG CGTCTATATC TGTGCCTCCG ACAGCGACAC GGTGCAGGTG
ATGGACCCGG TCACCGGCGA GATCCTGCAC GACCTGCCCT CGGGCGAAGA CCCCGAGCAG
TTCGTCCTGC ACCCCAACGA CCGCCACCTC TACATCGCCA ACGAGGATGA CGCGATCACC
ACCGTGGTGG ATACCGAGTC CCGCCAGGTC ATCGCCCAGA TCGATGTCGG GATCGAACCC
GAGGGCATGG CCGTCTCTCC GGACGGCAAG ATCGCCATCA CCACCTCCGA GACCACCAAC
ATGGCGCACT GGATCGACAC CGAGACCCAG ACGCTCTTCG CCAACACCCT GGTGGACAGC
CGCCCGCGCC ACGCGGAATT CATCAAGGAC GGGACCGAGC TCTGGGTCAG CGCCGAAATC
GGTGGCACGA TCTCGGTGTT CAACGTCGAA GACCAGAGCG AGATCACCAA GATCTCCTTC
GAGGTCGATG GCGTCCACCC CGACCGGGTG CAGCCCGTGG GGTTTGAATT CACTGAAGGC
GAAACCCACG CCTATGTGGC ACTCGGGCCG TCGAACCACG TCGCGGTGGT GAACGCCGAA
ACCTACGAGG TGGAGGACTA CATCCTCGTG GGCCGCCGGG TCTGGCACAT GGATTTCTCG
CCCGACCGCT CGCTGGTCTT CACCACCAAT GGGGTGTCCG GCGACGTGAC CGTGATCGAC
GTGGCCAAGC GCGAGGCGAT CAAGTCGATC AAGGTCGGCC GGTTCCCCTG GGGGGCCGCC
ATGCGTCCCA CCGAATAG
 
Protein sequence
MRPTLTAAAT TALLLGTTAA LASGEIWVTN EKDDTISVID IATLEVVRTI ETGERPRGIT 
FSKDYSRVYI CASDSDTVQV MDPVTGEILH DLPSGEDPEQ FVLHPNDRHL YIANEDDAIT
TVVDTESRQV IAQIDVGIEP EGMAVSPDGK IAITTSETTN MAHWIDTETQ TLFANTLVDS
RPRHAEFIKD GTELWVSAEI GGTISVFNVE DQSEITKISF EVDGVHPDRV QPVGFEFTEG
ETHAYVALGP SNHVAVVNAE TYEVEDYILV GRRVWHMDFS PDRSLVFTTN GVSGDVTVID
VAKREAIKSI KVGRFPWGAA MRPTE