| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2659 |
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| Symbol | coxL1 |
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| ID | 5713557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2815351 |
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| End bp | 2817726 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268583 |
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| Product | carbon monoxide dehydrogenase large chain |
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| Protein accession | YP_001533993 |
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| Protein GI | 159045199 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG ATGGTGGCAT TGGCGCCAGT TCAAAGCGCC GCGAAGACGT CCGGTTTCTG
ACCGGCCGGG GACGCTACAC GGACGACATC AACCTGAACA ACCAGACCTA CGCCTATTTC
CTGCGCTCGG AAGTGGCCCA TGGCAAGATC AACGGGATCG ACACCGCCGC CGCCGAAGGC
ATGGACGGGG TGATCCGGGT GTTCACCGCC AAGGATTTCG AGGGCGTGGG CGGGGTGCCC
TGCGGCTGGC AGGTCACCGA CATCCACGGA CAGCCCATGA AGGAGCCCAA GCACCCGGTG
CTGGCCGAGG GCAAGGTGCG CCATGTGGGC GACCCGATCG CCGTGGTCGT GGCCGAGAGC
CTGGAGCAGG CCCGCGATGC GGCCGAGGCG ATCGAGCTGG ATATCGAGGA GCTGCCCGCG
GTCATGGACA TGAAGGCCGC GCTGGCCGAG GGCGCCACCA AGGTGCATGA CGATCTGGAC
GACAACCTCT GCTACGAGTG GGGCTTTGTC GAAGAGAACC GCGCAGCGGT CGATGAGGCG
ATCAAGAACG CGCACCATGT CACGACGCTG GAGCTGACCA ACAACCGGCT GGTGGCCAAC
CCGATGGAGC CGCGCGTGGC GGTGGGGGAT TATCACCCCG GCACGCAGGA TTACACGCTC
TACACCACCT CGCAGAACCC CCATGTGATC CGGCTCCTGA TGGGCGCCTT CGTGCTGGGC
ATCCCCGAGC ACAAGCTGCG CGTCGTGGCC CCGGATGTGG GCGGCGGGTT CGGCTCGAAG
ATCTATCACT ATGCCGAGGA AGCCTTCGTC ACCTTCGCCA GCGGCCAGAT CGGGCGGCCG
GTGAAGTGGA CCTCGTCGCG CTCGGAGGCG TTCGTGTCGG ACGCGCATGG TCGCGATCAC
GTGACCAAGA TCGAGCTGGC CCTGGACGAG AACCACAAGT TCACCGCCCT GCGCTGCGAC
ACCTATGCCA ACATGGGGGC GTATCTGTCC ACCTTCGCGC CGTCGATCCC CACATGGCTG
CATGGCACGC TGCTGGCGGG CAACTACACC ACGCCGCTGA TCTACACCAA CGTGAAGGCG
GTGTTCACCA CCACCACGCC GGTGGATGCG TACCGTGGCG CGGGCCGTCC CGAGGCGACC
TTCCAGCTGG AGCGGGTCGT GGACAAGGCC GCGCGGGAGC TTGGCGTCGA CCCGGCGGAG
CTGCGCCGGA TCAACTTCAT CAAGCCCGAG CAGTTCCCCT ATGACACGCC GGTGGCGGTG
ACCTATGACA CCGGCAACTA CCACGCGACG CTCGAAAAGG GCCTGGAGAT GGCCGGGGCC
GACACGTTCG AGGCGCGCGC CGCCGAGAGC AAGGCTCGCG GCAAGCTGCG CGGCTTCGGC
CTGGCGCATT TCATCGAGGC CTGCGGCATC GCGCCCTCGA ACCTGGTGGG ACAGCTCGGC
GCGCGCGCGG GACTCTACGA GAGCGCCACG GTGCGGGTCA ACGCCACCGG CTCGATCAGC
GTGATGACGG GCTCGCACTC CCACGGGCAG GGGCATGAAA CCGCCTTCCC GCAGGTGGTC
GCGGAAATGC TCGGCATCGA CGAGAACATG ATCGAGATCG TCCATGGCGA CACCGCCAAT
ACGCCGATGG GCATGGGCAC CTATGGCTCA CGCTCCATCG CGGTGGGCGG CTCGGCCATG
GTGCGCGCGA CCGAGAAGAT CATCAACAAG GCCAAGAAGA TCGCAGCCCA CCTGCTGGAG
GCCGCCGAGG GCGACATCGA GCTCAAGGAC GGCGCGTTCA CGGTCGCGGG CACGGACAAA
TCCGTCGCCT GGGGGGATGT GACGCTGGCG GCCTATGTGC CCCACAACTA CCCGCTGGAG
GATATCGAGC CGGGGCTGGA GGAGACGGCG TTCTACGATC CGTCGAATTT CACCTACCCG
TCGGGCGCCT ATATCTGCGA GGTCGAGGTG GACCCGGACA CCGGCAAGGT GGACGTGCTG
GCCTTCACGG CGGCGGATGA TTTCGGCAAT GTCATCAACC CGATGATCGT CGAGGGCCAG
GTCCATGGCG GCGTGGCGCA GGGGATCGGG CAGGCGCTGC TCGAGAACTG CTCCTACGAT
GCGGACGGGC AGCTCCTGTC GGGGTCGTAC ATGGATTACA CCATGCCGCG GGCCGACGAT
CTGCCGATGT TCGAAGTGGA CCACTCCTGC ATCACGCCCT GCACCCACAA CCCGCTCGGG
GTGAAGGGCT GCGGCGAGGC CGGGGCCATC GGCTCCCCGC CGGCGGTGGT GAACGCGGTG
ATCGACGCGC TGCACCGGGC GGGCCAAACC CATGTGACCC ATATCGACAT GCCCCTGACG
CCGAGCCGCG TCTGGGCAGC GATCCACGGC AAGTAA
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| Protein sequence | MPKDGGIGAS SKRREDVRFL TGRGRYTDDI NLNNQTYAYF LRSEVAHGKI NGIDTAAAEG
MDGVIRVFTA KDFEGVGGVP CGWQVTDIHG QPMKEPKHPV LAEGKVRHVG DPIAVVVAES
LEQARDAAEA IELDIEELPA VMDMKAALAE GATKVHDDLD DNLCYEWGFV EENRAAVDEA
IKNAHHVTTL ELTNNRLVAN PMEPRVAVGD YHPGTQDYTL YTTSQNPHVI RLLMGAFVLG
IPEHKLRVVA PDVGGGFGSK IYHYAEEAFV TFASGQIGRP VKWTSSRSEA FVSDAHGRDH
VTKIELALDE NHKFTALRCD TYANMGAYLS TFAPSIPTWL HGTLLAGNYT TPLIYTNVKA
VFTTTTPVDA YRGAGRPEAT FQLERVVDKA ARELGVDPAE LRRINFIKPE QFPYDTPVAV
TYDTGNYHAT LEKGLEMAGA DTFEARAAES KARGKLRGFG LAHFIEACGI APSNLVGQLG
ARAGLYESAT VRVNATGSIS VMTGSHSHGQ GHETAFPQVV AEMLGIDENM IEIVHGDTAN
TPMGMGTYGS RSIAVGGSAM VRATEKIINK AKKIAAHLLE AAEGDIELKD GAFTVAGTDK
SVAWGDVTLA AYVPHNYPLE DIEPGLEETA FYDPSNFTYP SGAYICEVEV DPDTGKVDVL
AFTAADDFGN VINPMIVEGQ VHGGVAQGIG QALLENCSYD ADGQLLSGSY MDYTMPRADD
LPMFEVDHSC ITPCTHNPLG VKGCGEAGAI GSPPAVVNAV IDALHRAGQT HVTHIDMPLT
PSRVWAAIHG K
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