| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2656 |
|---|
| Symbol | |
|---|
| ID | 5713554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2811577 |
|---|
| End bp | 2813652 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641268580 |
|---|
| Product | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein |
|---|
| Protein accession | YP_001533990 |
|---|
| Protein GI | 159045196 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases
[COG2046] ATP sulfurylase (sulfate adenylyltransferase) |
|---|
| TIGRFAM ID | [TIGR00339] ATP sulphurylase
[TIGR00455] adenylylsulfate kinase (apsK) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC AGCCCAAACC GATCTCCGCC GAGGAGGAAG ACCTGCTCTT CCGCCTGCTG
CGGCAGCTCG ACCTGACCCC GGACGCCTCC CAGCGCGCCC TGGCCGGGGC ATTGGGCATC
TCCCTGGGCC GGGTCAATGC GCAGCTGCGC GCCGCCGCGG AGGCCGGGCT GATCGAGATC
ACAGAACGGA CCGGGACCGA CCGGCGCCAG CGTTTCGCCT ATGGCCTGAC GGCCCGGGGT
GCAGCGCAGA AAACCCGGCT CATCGACAAG TTCCTCGCCC GCAAGTTCAC CGAGTTCACC
GCCCTTCATG CCGAGCTGAC CGGCTCGGCC CAATACCCGA TCCCCCCCCA ATTCAGGAGC
TTTCCGATGC AAAACCCCCA CGCCCCGATC ACGGAGCTCT ACGTCTCCGC CGACAGCGCC
CAGAAGCTGA AGGTCGAAGC CGCGTCGCTT CCCTCCTGGG ACCTGACCCC GCGCCAGATC
TGCGATCTGG AGCTGCTAAT GAATGGCGGG TTCAACCCGC TCAAGGGCTT CCTCGGCAAG
GACGACTACG ACAGCGTGGT GGAAACCATG CGCCTGGCGG ACGGCTCGCT CTGGCCGATG
CCCATCACCC TGGATATCAG CCAGGATTTC GCCGACACGG TCGAGCCGGG CCAGGACATC
GCCCTGCGCG ACCAGGAGGG CGTGATCCTC GCCATCCTGT CGATCTCCGA CAAATACGTG
CCCAACAAGG CCCGCGAGGC CGAAATGGTC TTCGGCGCCG ACGACCTGGC GCATCCGGCG
GTGAACTACC TGCACCACGT CGCGGGCCCG GTCTATCTCG GCGGTGCCAT CACCGGCATC
CAGCAGCCGA TCCATTACGA CTTCCGCGCC CGCCGCGACA CGCCCAACGA GCTGCGCGCC
TATTTCCGCA AGCTCGGCTG GCGCAAGGTC GTGGCCTTCC AGACCCGCAA CCCGCTGCAC
CGCGCGCATC AGGAGCTGAC CTTCCGCGCC GCGCGCGAAT CCCAGGCCAA CCTGCTGATC
CACCCGGTCG TCGGCATGAC CAAGCCCGGC GATGTGGACC ACTTCACCCG CGTGCGCTGC
TACGAGGCGG TGCTCGACAA GTACCCGGCC GCCACCACCA CCATGAGCCT TCTGAACCTG
GCCATGCGCA TGGCCGGCCC GCGCGAGGCG GTCTGGCACG GGCTGATCCG CAAGAACCAC
GGTGTGACCC ATTTCATCGT CGGCCGCGAC CACGCCGGCC CCGGCAAGAA CTCCGCCGGG
GAGGATTTCT ACGGCCCCTA TGACGCGCAA GACCTCTTCC GCGAGCACGA AGAGGAAATG
GGCATCACCA TGGTGGACTT CAAACACATG GTCTGGGTCC AGGAGCGCGC GCAATACGAA
CCCATGGACG AGATCAAGGA CAAGGACGAG GTCACGATCC TGAACATCTC GGGCACCGAG
CTGCGCCGTC GCCTGTCCGA GGGGCTGGAG ATCCCCGAAT GGTTCTCCTT CCCCGAAGTG
GTGGCCGAAC TGCGCAAGAC CCGCCCGCCG CGGGCCAAGC AGGGCTTCAC CGTGTTTCTG
ACGGGGCTGT CCGGCTCGGG CAAGTCCACC GTGGCCAACG CGCTTATGGT CAAGCTGATG
GAAATGGGCG GCCGCCCGGT CACGCTGCTG GACGGCGACG TGGTCCGCAA GCACCTGTCG
TCCGAGCTCG GCTTCTCGAA GGAACACCGC GACATCAACA TCCGCCGCAT CGGCTATGTC
GCCTCCGAGA TCACCAAGAA CGGCGGCATC GCGATCTGCG CCCCCATCGC GCCCTACACC
GCCACCCGCC GGGCCGTGCG CGAGATGATC GAGGCCTATG GCGCCTTCGT GGAAATCCAC
GTCGCCACCA GCCTCGAGGA ATGCGAGCGC CGCGACCGCA AGGGGCTCTA CAAGCTGGCG
CGCGAGGGCA AGATCAAGGA GTTCACCGGG ATCTCCGACC CCTACGAGGC GCCGACCAAT
GCCGAGCTGG TGCTGGACAC CGAAGGGACC GAGGTCGACT ATTGCGCCCA GCAGGTGCTG
TTGAAGCTCG AATCCATGGG CCTCGTCGCG GCCTGA
|
|---|
| Protein sequence | MNAQPKPISA EEEDLLFRLL RQLDLTPDAS QRALAGALGI SLGRVNAQLR AAAEAGLIEI
TERTGTDRRQ RFAYGLTARG AAQKTRLIDK FLARKFTEFT ALHAELTGSA QYPIPPQFRS
FPMQNPHAPI TELYVSADSA QKLKVEAASL PSWDLTPRQI CDLELLMNGG FNPLKGFLGK
DDYDSVVETM RLADGSLWPM PITLDISQDF ADTVEPGQDI ALRDQEGVIL AILSISDKYV
PNKAREAEMV FGADDLAHPA VNYLHHVAGP VYLGGAITGI QQPIHYDFRA RRDTPNELRA
YFRKLGWRKV VAFQTRNPLH RAHQELTFRA ARESQANLLI HPVVGMTKPG DVDHFTRVRC
YEAVLDKYPA ATTTMSLLNL AMRMAGPREA VWHGLIRKNH GVTHFIVGRD HAGPGKNSAG
EDFYGPYDAQ DLFREHEEEM GITMVDFKHM VWVQERAQYE PMDEIKDKDE VTILNISGTE
LRRRLSEGLE IPEWFSFPEV VAELRKTRPP RAKQGFTVFL TGLSGSGKST VANALMVKLM
EMGGRPVTLL DGDVVRKHLS SELGFSKEHR DINIRRIGYV ASEITKNGGI AICAPIAPYT
ATRRAVREMI EAYGAFVEIH VATSLEECER RDRKGLYKLA REGKIKEFTG ISDPYEAPTN
AELVLDTEGT EVDYCAQQVL LKLESMGLVA A
|
|---|
| |