| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2655 |
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| Symbol | ccpA |
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| ID | 5713553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2810268 |
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| End bp | 2811320 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268579 |
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| Product | cytochrome-c peroxidase |
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| Protein accession | YP_001533989 |
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| Protein GI | 159045195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1858] Cytochrome c peroxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.872358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGTC ACCCAGCCCT CCGGTTTGGC ACTGTTTCCA TGCTTGTTCT GGCCGCGTCC
GCGGCGTCCG CGTCCGACCT GCAGGAGCAG GCGCGCGAGC TGTTCGAGCC GGTGCCCTCC
ACGATCCCGG CGCTGCGCGA CAACCCCGTC ACGCCGGAGA AGATCGACCT GGGCAAGGCG
CTGTTCTTCG ACCCGCGGAT GTCCGCGTCG GGGGTGTTTT CGTGCAATTC CTGCCACAAC
CTGGCGACGG GCGGCGACGA CAACATGCCG GTCTCGATCG GCCATGGCTG GCAGAAGGGG
CCGCGCAACT CGCCCACGGT GCTGAACGCG GTGTTCAACA TCGCGCAGTT CTGGGACGGG
CGGGCCGAGG ACCTGGCAGC GCAGGCCAAG GGGCCTGTGC AGGCGGGGGT CGAGATGGCC
AACACGCCGG AGAACGTGAT CGCGACGCTC AACTCCATGC CGCAATATGT GGAGTGGTTC
ACGGCCTCCT TTCCCGAAGA GGCCGACCCG GTGTCCTTCG ACAATTTCGC TAAGGCGATC
GAGGCCTACG AGGCCACGCT GATCACGCCC GCGCCCTTCG ATGCCTATCT GAACGGGGAC
GAGGCGGCGC TGAGCGAGGA CCAGAAGGAG GGCCTGGCGC TCTTCATCGA CAAGGGCTGC
GCCTCTTGCC ATAACGGGGT GAACCTGGGC GGCAACGGCT ACTATCCCTT CGGGCTGATC
GAGAAGCCGG GGGCGGATGT GCTGCCGCCC GATGACATGG GCCGATTCGC GGTGACCGAG
ACGGCGGATG ATTCCTATGT CTTCCGGGCC TCGCCCCTGC GCAATATCGA GCTGACGGCG
CCCTATTTCC ATTCCGGCGT GGTGTGGGAC CTGAAGGCCG CGGTGCAGAT CATGGGCGAC
TCGCAGCTCG GTGCCGATAT CACCGAGGAT GAGGCGGACA AGATCGTGGC CTTCCTGCGC
GCCCTGACCG GGGAGATGCC GGAGGTGGTC TATCCGATCC TGCCGGTGGA AACGGCGGCG
ACGCCGCGGC CCACGGGCGA GGTTCTGCCC TGA
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| Protein sequence | MACHPALRFG TVSMLVLAAS AASASDLQEQ ARELFEPVPS TIPALRDNPV TPEKIDLGKA
LFFDPRMSAS GVFSCNSCHN LATGGDDNMP VSIGHGWQKG PRNSPTVLNA VFNIAQFWDG
RAEDLAAQAK GPVQAGVEMA NTPENVIATL NSMPQYVEWF TASFPEEADP VSFDNFAKAI
EAYEATLITP APFDAYLNGD EAALSEDQKE GLALFIDKGC ASCHNGVNLG GNGYYPFGLI
EKPGADVLPP DDMGRFAVTE TADDSYVFRA SPLRNIELTA PYFHSGVVWD LKAAVQIMGD
SQLGADITED EADKIVAFLR ALTGEMPEVV YPILPVETAA TPRPTGEVLP
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