Gene Dshi_2651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2651 
Symbol 
ID5713549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2806576 
End bp2807334 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID641268575 
Producthypothetical protein 
Protein accessionYP_001533985 
Protein GI159045191 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.683201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG AGATCCTCAC ATCGCCCGCC CTGCCGGTGG CGCACGGGTT CTTCACCCGC 
AAGGGCGGCG CGTCCTCGGG CGTGTTCGAG GGGCTCAATT GCGGCCCCGG CTCCAGCGAC
CAGTCCGACA CCGTGGCCCT GAACCGCGCC CGCGTGGCCG CGGCGATGGA GGTGCCGGTC
AGTGCGCTCG CCACGGTGAA CCAGGTTCAT TCGCCGGACG TGGTCACGCT CGAGGCCGCC
CCGGCGCCCG GCCCTAAACC CACCGCCGAC GCCATGGTCA CCGCGACCCC GGGCCTCGTT
CTCGGCATCC TGACCGCCGA TTGCCAGCCG GTGCTCTTCG CCGACGGGCA GGCGGGCGTC
ATCGGCGCGG CCCATGCGGG CTGGCGCGGC GCGCTGGACG GCGTGCTGGA GGCCACGATC
GACGCCATGG TGGCCGCGGG CGCCCGGCGC GAGGCGATCA CCGCGGTGAT CGGCCCGTCG
ATCTCCCAGC GGGCCTACGA GGTCGGGCCC GAGTTTCTCG ACCGTTTCCT CGACGACGAC
CCCGAGAACA GCCGCTTTTT CGCCGGGGGC CAGGACGGCC GGGCGCATTT CGACCTGATC
TCCTACGGGC TGACCCGGCT GCGGGGCGCG GGCATCGCCC AGGCCGAGTG GACCGGCCAT
TGCACCTACA GCGATCCGGG CCGGTTCTTT TCCTACCGCC GCAGCGTCCA TGGGGGCGAG
GCAGATTACG GCCGGCTGAT CTCGACCATC CGGCTCTGA
 
Protein sequence
MTLEILTSPA LPVAHGFFTR KGGASSGVFE GLNCGPGSSD QSDTVALNRA RVAAAMEVPV 
SALATVNQVH SPDVVTLEAA PAPGPKPTAD AMVTATPGLV LGILTADCQP VLFADGQAGV
IGAAHAGWRG ALDGVLEATI DAMVAAGARR EAITAVIGPS ISQRAYEVGP EFLDRFLDDD
PENSRFFAGG QDGRAHFDLI SYGLTRLRGA GIAQAEWTGH CTYSDPGRFF SYRRSVHGGE
ADYGRLISTI RL