| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2650 |
|---|
| Symbol | |
|---|
| ID | 5713548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 2805488 |
|---|
| End bp | 2806579 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641268574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001533984 |
|---|
| Protein GI | 159045190 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC TGGCGGAGAT CCTCGCCGCG CGGATCGCCG CGACCGGCCC GATCACCGTG
GCCGAGTTCA TGGCCGAATG CCTGCTGCAC CCCACCCACG GCTATTACAC CACGCGCACG
CCCTTCGGTC AGGCGGGCGA TTTCACCACC GCACCGGAGA TCAGCCAGAT GTTCGGGGAA
TTGCTGGGCC TCGCGCTGGC CCAGGCCTGG CACGACCAGG GCGCACCGCC CGGCGCCATT
CTTGCCGAGA TCGGGCCGGG GCGCGGCACG CTCATGGCCG ACATCCGGCG CGTGCTGAAA
CAGGTGCCCG GCGCCGCCAC CCTGCGCCCC CACCTGGTTG AGGCCAGCCC CGCCCTGCGC
GCCGAGCAGG CAACCCGCGT GCCGGAGGCC GTCCGGCTCG ACCGGGTGGA GGATCTGCCC
GACGCGCCGC TCTTGCTGGT GGCCAACGAG TTCTTCGATG CCCTGCCCAT CCGCCAGTTC
GAGCGCCACG CCGCGGGCTG GGCCGAACGG CAGATCGGGC TGGCCGAGGG CGCGCTGGCC
TTCGGGCGCG CCCAACCCGC GGCGCTGGCA TCCCTCGCCC ACCGGATGGC GGATACAGGC
CCCGGCGATC TGGTCGAAAC CTGCGCCCCG GCGCAGCCGA TCATCGCCGA GATCGCGGGC
CGCATCGCGC GCCACGGCGG CGCGGCGATC ATTGCAGACT ATGGCGACTG GCGCTCGAAG
GGCGACACGT TGCAGGCGGT GCGCGCCCAT CGCCCGGACC CGGTGCTGGC CCATCCCGGC
CAGGCCGACC TGACCGCTCA TGTGGATTTC GAGCCGCTGG CGCAGGCCGC GCGCACCGCC
GGCGCGAGCG TATCAGCGAT GATCCCCCAG GGCGTGTTTC TTGAACGGCT GGGCATCACC
ACCCGCGCCC AGGCCCTCGC CACGGGACTG GAAGGCGCGG CATTGCAAAG CCACATCGCC
GCACATCGCC GCTTGACCCA CCCGGAGGAA ATGGGAACCC TGTTCAAAGT GCTCTGTGTG
AGTCCCCCAT CCGCGCCCCC CGTGCCGGGG TCCATCGCCC CGCCCAACCC CGGGAAACCC
GACGCCCCAT GA
|
|---|
| Protein sequence | MTPLAEILAA RIAATGPITV AEFMAECLLH PTHGYYTTRT PFGQAGDFTT APEISQMFGE
LLGLALAQAW HDQGAPPGAI LAEIGPGRGT LMADIRRVLK QVPGAATLRP HLVEASPALR
AEQATRVPEA VRLDRVEDLP DAPLLLVANE FFDALPIRQF ERHAAGWAER QIGLAEGALA
FGRAQPAALA SLAHRMADTG PGDLVETCAP AQPIIAEIAG RIARHGGAAI IADYGDWRSK
GDTLQAVRAH RPDPVLAHPG QADLTAHVDF EPLAQAARTA GASVSAMIPQ GVFLERLGIT
TRAQALATGL EGAALQSHIA AHRRLTHPEE MGTLFKVLCV SPPSAPPVPG SIAPPNPGKP
DAP
|
|---|
| |