Gene Dshi_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2646 
Symbol 
ID5713544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2802512 
End bp2803042 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID641268570 
Producthypothetical protein 
Protein accessionYP_001533980 
Protein GI159045186 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.364701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCA GAAAAACGGG GCCGGGCATG TCACTTGTCG AGCAGCATTA TGAGACCGAA 
GACCTTCACC CGATCGACAT CGTCGAATCG CTGGCGGAGC ATCATGACTG GGATTTCGAC
CGTATCGCGG ATGACCAGAT CGCCATGGCG GTGGAAGGCC AGTGGCGGAC CTATTCGGTC
ACGCTCGCCT GGTCCCATTA CGACGAAACC CTGCGGCTGG TGATGACCTT CGACATGGAG
CCGCCGGCGC ACCGGGTTCC GGCGCTGCAC GCGGTGCTGA ACGCGGCCAA CGACAAGTGC
TGGACCGGGG CGTTCACCCA TTGGGCGCAA CAGAACCTGC TGGTGTACCG CTACGCCCTG
GTGCTCAGCG GCGGCGCGCT GGCCGGGCCG GAGCAGATCG ACCGGATGCT GACCACGGCG
TTTCTGAATT GCGAGCGGTT CTACCCCGCC TTCCAACTGG CCACATGGGG CGAGGAAGCC
CCCGAGGCGG CCATTCAGGT TGCCATTGCG GAGGCTTACG GGCGCGCCTA A
 
Protein sequence
MAGRKTGPGM SLVEQHYETE DLHPIDIVES LAEHHDWDFD RIADDQIAMA VEGQWRTYSV 
TLAWSHYDET LRLVMTFDME PPAHRVPALH AVLNAANDKC WTGAFTHWAQ QNLLVYRYAL
VLSGGALAGP EQIDRMLTTA FLNCERFYPA FQLATWGEEA PEAAIQVAIA EAYGRA