| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2643 |
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| Symbol | |
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| ID | 5713541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2800367 |
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| End bp | 2801317 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641268567 |
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| Product | putative glycerate dehydrogenase |
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| Protein accession | YP_001533977 |
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| Protein GI | 159045183 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC TGATTTCCCG GCCCTTGCCG GAGGCGGTTC TGGCGCGCGC CCGGGCGCGG
TTCGATTGCA CGCTGCGCGA GACGACCCAG CCCATGCGCG CAGAGGAGCT GCGCGGGGCC
CTGCGGGATT ATGACCTCGT GCTGCCCACG CTCGGCGACG CGTTCTCGGC GGAGGTGTTC
GCCGATGTGC CGGAGCCCCG CGCGCGGCTG CTGGCGAATT TCGGGGTGGG CTACAACCAT
ATCGATGCGG TGGCGGCGCG CGCGGCGGGG GTGGCGGTGA CCAACACCCC GGGTGCCGTG
ACCGATGCCA CGGCGGACAC GGCGCTGACC CTGATCCTGA TGGCGGCGCG CCGCGCGGGC
GAGGGGGAGC GGCTGGTCCG CGCGGGCACA TGGACGGGCT GGCACCCGAC GCAGATGCTG
GGCCTGCATG TGACCGGCAA GACCCTGGGC GTGATCGGAA TGGGCCGGAT CGGCCAGGCG
ATCGCCGCGC GCTGCCACCA CGGGTTCGGG ATGGAGGTGG TGTTCTACAA CCGCTCGCCC
AAGACGCCCG ATCTGCCAGC GCGGCAATTG GCCAGCGTGG CCGAGGTCAT GGCAGCGGCG
GATATCGTGG TGGTCGCCGT GCCCGGCGGG GCCGAGACCC ATCACCTGAT CGGGGCGGAG
GCGTTTGCCG CGATGCAGCC CCATGCGGTT TTCGTCAACA TCGCCCGGGG CGACGTGGTG
GACGAGGCCG CGTTGATCGC GGCGCTGCAG GCAGGGCAGC TCGGCGCGGC GGGGCTCGAT
GTCTACGAGT TCGAGCCTGC GGTGCCCGAG GCCCTGATCG GGATGGAGAA TGTCGTGCTG
CTGCCCCATC TCGGCACCGC CGCGCTGGAG GTGCGCGAGG CGATGGGGCA CATGGCGCTC
GACAATCTTA TCGCTTGTGC CGAGGGCGCG CCGCTGCCCA ACCCGGTGTG A
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| Protein sequence | MKLLISRPLP EAVLARARAR FDCTLRETTQ PMRAEELRGA LRDYDLVLPT LGDAFSAEVF
ADVPEPRARL LANFGVGYNH IDAVAARAAG VAVTNTPGAV TDATADTALT LILMAARRAG
EGERLVRAGT WTGWHPTQML GLHVTGKTLG VIGMGRIGQA IAARCHHGFG MEVVFYNRSP
KTPDLPARQL ASVAEVMAAA DIVVVAVPGG AETHHLIGAE AFAAMQPHAV FVNIARGDVV
DEAALIAALQ AGQLGAAGLD VYEFEPAVPE ALIGMENVVL LPHLGTAALE VREAMGHMAL
DNLIACAEGA PLPNPV
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